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  • Begins migration to zarr v3 writing by default (will follow this up with a PR to remove zarr v2 the package as well)
  • Tests added
  • Release note added (or unnecessary)

@ilan-gold ilan-gold added this to the 0.12.8 milestone Jan 21, 2026
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codecov bot commented Jan 21, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 84.56%. Comparing base (96a1529) to head (0d8d716).
⚠️ Report is 4 commits behind head on main.
✅ All tests successful. No failed tests found.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #2306      +/-   ##
==========================================
- Coverage   86.61%   84.56%   -2.06%     
==========================================
  Files          46       46              
  Lines        7224     7228       +4     
==========================================
- Hits         6257     6112     -145     
- Misses        967     1116     +149     
Files with missing lines Coverage Δ
src/anndata/_io/zarr.py 82.79% <100.00%> (+0.77%) ⬆️

... and 7 files with indirect coverage changes

@ilan-gold ilan-gold self-assigned this Jan 22, 2026
@ilan-gold ilan-gold merged commit 2e33b37 into main Jan 27, 2026
21 checks passed
@ilan-gold ilan-gold deleted the ig/zarr_v2_warning branch January 27, 2026 09:54
meeseeksmachine pushed a commit to meeseeksmachine/anndata that referenced this pull request Jan 27, 2026
ilan-gold added a commit that referenced this pull request Jan 27, 2026
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3 participants