Repositories list

• cbioportal-core

  Public

  cBioPortal/cbioportal-core’s past year of commit activity
  Externalized cBioPortal Core

  Java

  •24•4•25•18•Updated Mar 13, 2026Mar 13, 2026

• datahub

  Public

  cBioPortal/datahub’s past year of commit activity
  A centralized location for storing curated data from cBioPortal

  HTML

  •140•202•138•16•Updated Mar 12, 2026Mar 12, 2026

• cbioportal

  Public

  cBioPortal/cbioportal’s past year of commit activity
  cBioPortal for Cancer Genomics

  visualizationsciencecancer-genomics+ 1

  visualizationsciencecancer-genomicsprecision-medicine

  Java

  •

  GNU Affero General Public License v3.0

  •835•971•326•65•Updated Mar 12, 2026Mar 12, 2026

• cbioportal-cell-explorer

  Public

  cBioPortal/cbioportal-cell-explorer’s past year of commit activity
  TypeScript

  •1•0•15•4•Updated Mar 12, 2026Mar 12, 2026

• cbioportal-frontend

  Public

  cBioPortal/cbioportal-frontend’s past year of commit activity
  React Frontend of cBioPortal :tada:

  reactmobxcancer-genomics

  reactmobxcancer-genomics

  TypeScript

  •

  GNU Affero General Public License v3.0

  •402•140•0•47•Updated Mar 12, 2026Mar 12, 2026

• LibreChat

  Public

  cBioPortal/LibreChat’s past year of commit activity
  Enhanced ChatGPT Clone: Features Agents, MCP, DeepSeek, Anthropic, AWS, OpenAI, Responses API, Azure, Groq, o1, GPT-5, Mistral, OpenRouter, Vertex AI, Gemini, A…

  TypeScript

  •

  MIT License

  •7k•0•0•3•Updated Mar 11, 2026Mar 11, 2026

• oncotree

  Public

  cBioPortal/oncotree’s past year of commit activity
  Go

  •

  Creative Commons Attribution 4.0 International

  •30•47•31•14•Updated Mar 5, 2026Mar 5, 2026

• cbioportal-mcp

  Public

  cBioPortal/cbioportal-mcp’s past year of commit activity
  Python

  •6•4•4•4•Updated Mar 2, 2026Mar 2, 2026

• cbioportal-mcp-qa

  Public
  Python

  •2•3•12•2•Updated Mar 2, 2026Mar 2, 2026

• cbioportal-test

  Public

  cBioPortal/cbioportal-test’s past year of commit activity
  Tests for cBioPortal.

  HTML

  •

  MIT License

  •2•0•0•0•Updated Mar 2, 2026Mar 2, 2026

• installation-map

  Public
  cBioPortal Installation Map

  TypeScript

  •4•0•0•0•Updated Mar 1, 2026Mar 1, 2026

• cancerhotspots

  Public
  Cancer Hotspots

  JavaScript

  •

  GNU Affero General Public License v3.0

  •10•6•4•3•Updated Feb 26, 2026Feb 26, 2026

• clinical-data-dictionary

  Public
  Clinical Attribute Web Service for retrieving clinical attribute names and metadata.

  Java

  •9•6•4•4•Updated Feb 25, 2026Feb 25, 2026

• GSoC

  Public
  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

  60•186•31•0•Updated Feb 19, 2026Feb 19, 2026

• cbioportal-docker-compose

  Public

  cBioPortal/cbioportal-docker-compose’s past year of commit activity
  Run cBioPortal using Docker Compose

  Shell

  •56•23•5•3•Updated Feb 5, 2026Feb 5, 2026

• cbioportal-vitessce-proxy

  Public
  TypeScript

  •1•0•2•1•Updated Feb 3, 2026Feb 3, 2026

• datahub-study-curation-tools

  Public
  Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.

  HTML

  •

  GNU Affero General Public License v3.0

  •20•21•2•5•Updated Jan 30, 2026Jan 30, 2026

• cbioportal-helm

  Public
  Helm charts for cBioPortal Kubernetes Deployment

  1•0•1•0•Updated Jan 7, 2026Jan 7, 2026

• .github

  Public
  README for cBioPortal Org Page

  2•0•0•1•Updated Dec 29, 2025Dec 29, 2025

• cbioportal-article-classification

  Public
  Tool for fetching, classifying, and analyzing papers that cite cBioPortal

  Python

  •0•3•0•0•Updated Dec 20, 2025Dec 20, 2025

• msk-ecosystems-validator

  Public
  Python

  •0•0•0•0•Updated Nov 21, 2025Nov 21, 2025

• clickhouse-only-importer-prototype

  Public
  Go

  •0•0•0•0•Updated Nov 5, 2025Nov 5, 2025

• cellxgene-dash

  Public
  JavaScript

  •0•0•0•0•Updated Oct 23, 2025Oct 23, 2025

• mcp_experiments

  Public
  cBioPortal MCP Experiments

  MIT License

  •0•0•0•0•Updated Sep 16, 2025Sep 16, 2025

• session-service

  Public
  Java

  •21•7•12•1•Updated Sep 8, 2025Sep 8, 2025

• h5ad2cbioportaldb

  Public
  Python CLI tool for importing h5ad single-cell files into cBioPortal's ClickHouse database

  Python

  •0•0•0•0•Updated Jun 30, 2025Jun 30, 2025

• cBioPubChat

  Public
  LLM-powered chatbot for exploring cBioPortal publications.

  Python

  •1•2•0•1•Updated Jun 12, 2025Jun 12, 2025

• cbio-case-summarizer

  Public
  LLM generated summaries for cases in cBioPortal

  Python

  •

  MIT License

  •0•0•0•1•Updated Jun 5, 2025Jun 5, 2025

• temp-genie-page

  Public
  HTML

  •0•0•0•0•Updated Apr 7, 2025Apr 7, 2025

• cbiohubpy

  Public
  Python package and CLI tool simplifying the analysis of data from cBioPortal

  Python

  •

  MIT License

  •1•1•0•0•Updated Jan 2, 2025Jan 2, 2025