kgallik / ImageJScripts Public

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All the scripts and snippets I find helpful for working in ImageJ

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
All Together Macro.ijm		All Together Macro.ijm
Auto_Local_Threshold_test.java		Auto_Local_Threshold_test.java
Batch_Reorder_Stacks.ijm		Batch_Reorder_Stacks.ijm
Batch_Template.ijm		Batch_Template.ijm
Create_ROI_Duplicate.ijm		Create_ROI_Duplicate.ijm
DAB_Stain_Area.ijm		DAB_Stain_Area.ijm
Ed_Evans_Deconvolution_Script.groovy		Ed_Evans_Deconvolution_Script.groovy
Enhance_Contrast.ijm		Enhance_Contrast.ijm
Enhance_Contrast_2.ijm		Enhance_Contrast_2.ijm
Exporting_Bounding_Boxes_As_Arrays_Joe_Longo_SOW.ijm		Exporting_Bounding_Boxes_As_Arrays_Joe_Longo_SOW.ijm
Generic_Split_and_save_channel.ijm		Generic_Split_and_save_channel.ijm
Getting ROIs.ijm		Getting ROIs.ijm
ImagePrepFprCircleSkinner.ijm		ImagePrepFprCircleSkinner.ijm
ImagePrepFprCircleSkinner_MultichannelImage.ijm		ImagePrepFprCircleSkinner_MultichannelImage.ijm
Measuring particles in ROI.ijm		Measuring particles in ROI.ijm
Merging channels macro.ijm		Merging channels macro.ijm
Mouse_fluff_predictions.ijm		Mouse_fluff_predictions.ijm
Mouse_fluff_uncertainty.ijm		Mouse_fluff_uncertainty.ijm
Process_Folder_Ilaria_EnhanceContrast.ijm		Process_Folder_Ilaria_EnhanceContrast.ijm
Processing Macro.ijm		Processing Macro.ijm
Project_split_and_save_channels_specific_LUTs.ijm		Project_split_and_save_channels_specific_LUTs.ijm
README.md		README.md
Relabel_Atlas_Push_Image_GPU_CLIJ.ijm		Relabel_Atlas_Push_Image_GPU_CLIJ.ijm
Split_and_save_channel.ijm		Split_and_save_channel.ijm
StarDist_Batch.py		StarDist_Batch.py
Tile_Image.ijm		Tile_Image.ijm
Whole_tissue_broken.ijm		Whole_tissue_broken.ijm