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pip(deps): bump biopython from 1.86 to 1.87#454

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pip(deps): bump biopython from 1.86 to 1.87#454
dependabot[bot] wants to merge 1 commit intodevfrom
dependabot/pip/dev/biopython-1.87

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@dependabot dependabot Bot commented on behalf of github Apr 6, 2026

Bumps biopython from 1.86 to 1.87.

Changelog

Sourced from biopython's changelog.

30 March 2026: Biopython 1.87

Migrated from setup.py to pyproject.toml for packaging configuration.

Addressed security issue CVE-2025-68463 in Bio.Entrez.Parser if parsing untrusted files.

Additionally, a number of small bugs and typos have been fixed with additions to the test suite and type annotations.

Many thanks to the Biopython developers and community for making this release possible, especially the following contributors:

  • Michiel de Hoon
  • Peter Cock
  • Timothy Dennis (first contribution)
  • Ziyan Rao (first contribution)
  • Manuel Lera-Ramirez
  • Sebastian Pipping
Commits

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Bumps [biopython](https://github.com/biopython/biopython) from 1.86 to 1.87.
- [Changelog](https://github.com/biopython/biopython/blob/master/NEWS.rst)
- [Commits](https://github.com/biopython/biopython/commits)

---
updated-dependencies:
- dependency-name: biopython
  dependency-version: '1.87'
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Apr 6, 2026
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