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Minimal Instillation errors

Status: Open.

#244 In bokulich-lab/RESCRIPt;

· AlexaBennett opened on Oct 29, 2025

Add deprecation warnings for several actions

Status: Open.

#242 In bokulich-lab/RESCRIPt;

· mikerobeson opened on Oct 7, 2025

ENH: Leverage GitHub API to fetch latest data from PR2, ...

Status: Open.

#241 In bokulich-lab/RESCRIPt;

· mikerobeson opened on Sep 29, 2025

cannot import name 'GenomeApi' from 'ncbi.datasets.openapi'

Status: Open.

#238 In bokulich-lab/RESCRIPt;

· colinbrislawn opened on Aug 4, 2025

ENH: refactor <code>orient-seqs</code> revcomp mode to use vsearch <code>--fastx_revcomp</code>

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#224 In bokulich-lab/RESCRIPt;

· nbokulich opened on Apr 3, 2025

ENH: parallelization for <code>orient-reads</code>

Status: Open.

#221 In bokulich-lab/RESCRIPt;

· nbokulich opened on Apr 2, 2025

Update help text for clarity: <code>dereplicate --p-mode super</code>

Status: Open.

#165 In bokulich-lab/RESCRIPt;

· mikerobeson opened on Oct 5, 2023

Remove heavy dependencies

Status: Open.

#163 In bokulich-lab/RESCRIPt;

· ebolyen opened on Sep 28, 2023

Sequence identifier warnings from <code>get-ncbi-data</code>.

Status: Open.

#158 In bokulich-lab/RESCRIPt;

· mikerobeson opened on May 10, 2023

ENH: action to get preformatted blast databases

Status: Open.

#135 In bokulich-lab/RESCRIPt;

· nbokulich opened on May 17, 2022

ENH: refactor + parallelize the <code>evaluate-fit-classifier</code> and cross-validate pipelines

Status: Open.

#131 In bokulich-lab/RESCRIPt;

· nbokulich opened on Mar 23, 2022

[ENH] <code>trim-alignment</code>: how to deal with gappy primer alignments?

Status: Open.

#129 In bokulich-lab/RESCRIPt;

· nbokulich opened on Mar 19, 2022