v0.10.0

New release which removes the incorrect calculation of generalised R2 from neutral.fit and replaces it with three different types of pseudo R2 calculations

v0.9.15

Fixed a bug in the ps_venn/ps_euler functions. When running with plot=FALSE some taxa were falsely omitted in the output when group had more than 3 levels.

v0.9.14

ps_venn and ps_euler can now return a list of shared and unique taxa across groups, when run with plot=FALSE

v0.9.13

Add CLR transformation function, with built-in multiplicative zero-replacement

v0.9.12

Added ps_clean_tax function

v0.9.11

• A few bug fixes
• Add a pruning function
• Add extra functionality to some functions

v0.9.7

• Added a function for drawing Venn diagrams of shared taxa/ASVs/OTUs across sample groups from a phyloseq object
• Changed name of phylo_euler to ps_euler

v0.9.6

• Added a function for drawing Euler diagrams of shared taxa/ASVs/OTUs across sample groups from a phyloseq object

v0.9.5

• Added (partial) omega-squared calculation of effect sizes for PERMANOVA (adonis) models
• Added a (theoretical) rarefaction curve function for phyloseq objects

v0.9.4

Added parallel versions of the ses.mpd and ses.mntd functions from the picante package:
ses.mpd.par and ses.mntd.par