Collection of code and documentation to conduct fine-mapping and colocalization analysis for PanKbase and PanKgraph.
1_eQTL-gtex-susie: code and instruction on doing fine-mapping analysis for gene-level QTL pancreatic tissue signals.1_eQTL-inspire-susie: code and instruction on doing fine-mapping analysis for gene-level QTL islet tissue signals.1_exonQTL-inspire-susie: code and instruction on doing fine-mapping analysis for exon-level QTL islet tissue signals.1_sQTL-gtex-susie: code and instruction on doing fine-mapping analysis for splicing-level QTL pancreatic tissue signals.1_t1d-susie: code and instruction on doing fine-mapping analysis for T1D GWAS signals.2_coloc: code and instruction on doing colocalization analysis for T1D and QTL signals.
Ha Vu (vthihong at umich.edu) or Steve Parker (scjp at umich.edu)