Add SOFA-2 (JAMA 2025) derived table for MIMIC-IV#1973
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rsamei wants to merge 1 commit intoMIT-LCP:mainfrom
Open
Add SOFA-2 (JAMA 2025) derived table for MIMIC-IV#1973rsamei wants to merge 1 commit intoMIT-LCP:mainfrom
rsamei wants to merge 1 commit intoMIT-LCP:mainfrom
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Description
This PR introduces the SQL implementation of the updated Sequential Organ Failure Assessment 2.0 (SOFA-2) score for the MIMIC-IV database.
As a contributor to the original SOFA-2 publication (JAMA, 2025. doi:10.1001/jama.2025.20516), I wanted to provide the community an hourly derivation that adheres to the newly published thresholds and complex clinical footnotes.
Clinical Nuances Handled:
please refer to : https://jamanetwork.com/journals/jama/fullarticle/2840822 table 2
Note on Dialect: This script is currently written using BigQuery functions (e.g.,
SAFE_DIVIDE,ARRAY_AGG). I am happy to collaborate on porting this to PostgreSQL if the maintainers would like to adapt it for standard dialect/builds!