Make the tool compatible with numpy 2.4

[bouweandela]

Description

Closes #2940
Closes #2934

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[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 95.59%. Comparing base (82b282f) to head (63af182).
⚠️ Report is 2 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #2941   +/-   ##
=======================================
  Coverage   95.59%   95.59%           
=======================================
  Files         266      266           
  Lines       15573    15573           
=======================================
  Hits        14887    14887           
  Misses        686      686           

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[schlunma]

Looks good to me! Thanks 🚀