issue(medcat-tutorials): CU-869c87xpy Make sure all the tests run against current state of core lib

[mart-r]

Turns out the patching system introduced in #27 was merged in some kind of debug state where it didn't actually do what it was supposed to.
That meant that the tutorials were never actually being tested against the current state of the core lib.

So this PR fixes that.

PS:
After this is done, I want to do a follow-up PR for #333 and #343 such that the script there uses the script here to bump the install targets in notebooks as well.

NOTE: Should be good to go after #349 is merged into this one Done now

EDIT:
Added a check for the script that fails if there's not enough changes through the notebook patcher.
So it fails if you have too big a number:

% python .ci/patch_notebook_installs.py . -c 5 
[PATCHED] notebooks/introductory/meta/1._Add_a_MetaCat_to_a_Model.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[meta-cat]\"'
[PATCHED] notebooks/introductory/relcat/1._Supervised_Training_Relation_Extraction.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[spacy,rel-cat,meta-cat]\"'
[PATCHED] notebooks/introductory/relcat/2._Infering_relations_from_annotations_with_Relation_toolkit.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[spacy,rel-cat]\"'
[PATCHED] notebooks/introductory/migration/1._Migrate_v1_model_to_v2.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[meta-cat,spacy,deid]\"'
Expected a minimum of 5 changes,but only found 4 changes. This will force a non-zero exit status so GHA workflow can fail
% echo $?
1

But is successful otherwise:

% python .ci/patch_notebook_installs.py . -c 4
[PATCHED] notebooks/introductory/meta/1._Add_a_MetaCat_to_a_Model.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[meta-cat]\"'
[PATCHED] notebooks/introductory/relcat/1._Supervised_Training_Relation_Extraction.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[spacy,rel-cat,meta-cat]\"'
[PATCHED] notebooks/introductory/relcat/2._Infering_relations_from_annotations_with_Relation_toolkit.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[spacy,rel-cat]\"'
[PATCHED] notebooks/introductory/migration/1._Migrate_v1_model_to_v2.ipynb
 with: '! pip install \"/Users/martratas/Documents/CogStack/.MedCAT.nosync/monorepo-nlp/medcat-v2[meta-cat,spacy,deid]\"'
% echo $?                                     
0

[tomolopolis]

Task linked: CU-869c87xpy Make sure they test against current state of core lib

[alhendrickson]

Assuming this regex works - lgtm

[alhendrickson]

Can probably remove these now, assuming they were for debugging

[mart-r]

Yeah, should do.

Though I think it would be good to include something that makes this fail if there's nothing changed. I've got a decent idea for that.