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from pickle import TRUE
import sys
import os
import math
import typing
import logging
import time
from pathlib import Path
import warnings
import argparse
import pdb
import glob
import re
import numpy as np
import torch
import torch.nn as nn
from torch.nn import parallel
import torch.optim as optim
from torch.utils.data import DataLoader
import torchvision
import matplotlib.pyplot as plt
import matplotlib
plt.rcParams['axes.xmargin'] = 0
import copy
sys.path.append('../')
from utils import print_network, get_plotting_func, onehot
from utils import mseloss_to_loglikelyhood, TargetLoss, r2_loss
from utils import str2bool
from models import VAEModel, VAEModel_BE, CVAEModel, TEModel, ColorClassifier
from models.misc import init_weight
from yaml_config import getStructuredArgs
import warnings
warnings.filterwarnings("ignore", category=UserWarning)
def main_TE(args, train_loader=None, val_loader=None):
#######################################################
# build Y_module
Y_module = args.Y_module_type(**args.Y_module_args_dict)
if args.parallel:
Y_module = nn.DataParallel(Y_module)
Y_module = Y_module.to(args.device)
Y_module.apply(init_weight)
if args.Y_checkpoint > 0:
if args.Y_checkpoint_foldername:
model_path = f'{args.log_dir}/{args.Y_checkpoint_foldername}/Y_module_{args.Y_checkpoint}.ckpt'
else:
model_path = f'{args.log_dir}/{args.exp_name}/Y_module_{args.Y_checkpoint}.ckpt'
Y_module.load_state_dict(torch.load(model_path,map_location=args.device))
print(f'Resume from Y checkpoint epoch {args.Y_checkpoint}')
Y_module_at_train = args.Y_continuetrain
else:
print('Train Y module from scratch')
Y_module_at_train = True
###########################################################
# build TE_module
model = TEModel(Y_module=Y_module, **args.TE_module_args_dict)
if args.parallel:
model = nn.DataParallel(model)
model = model.to(args.device)
params = model.parameters()
print_network(model)
if args.TE_checkpoint > 0:
if args.TE_checkpoint_foldername:
model_path = f'{args.log_dir}/{args.TE_checkpoint_foldername}/TE_{args.TE_checkpoint}.ckpt'
print(f'Resume from other TE checkpoint folder {args.TE_checkpoint_foldername}')
else:
model_path = f'{args.log_dir}/{args.exp_name}/TE_{args.TE_checkpoint}.ckpt'
model.load_state_dict(torch.load(model_path))
print(f'Resume from TE checkpoint epoch {args.TE_checkpoint}')
print(model_path)
else:
print('Train TE model from scratch')
color_clf = None
if args.color_clf:
color_clf = ColorClassifier(3, 32, 7).to(args.device)
color_clf.load_state_dict(torch.load(args.color_clf_ckpt))
print('Create train & valid datasets')
train_dset = args.dataset_class(**args.trainset_argu)
valid_dset = args.dataset_class(**args.validset_argu) # NOTE: this is validation data
train_loader = DataLoader(train_dset, batch_size=args.test_batch_size, shuffle=False)
valid_loader = DataLoader(valid_dset, batch_size=args.test_batch_size, shuffle=False)
print('Create test dataset')
test_dset = args.dataset_class(**args.testset_argu)
test_loader = DataLoader(test_dset, batch_size=args.test_batch_size, shuffle=False)
# create plot function
plot_results = get_plotting_func(args.dataset_name)
#return_test = test_TE(args, train_loader, model, plot_results, color_clf, split='train')
#return_test = test_TE(args, valid_loader, model, plot_results, color_clf, split='valid')
return_test = test_TE(args, test_loader, model, plot_results, color_clf, split='test')
if args.color_clf:
test_loss_all, test_loss_recon, test_loss_recon_loglikelihood, test_loss_kldiv, test_loss_y_recon, test_loss_y_recon_loglikelihood, test_loss_y_kldiv, test_corrected = return_test
test_log = (test_loss_all, test_loss_recon, test_loss_recon_loglikelihood, test_loss_kldiv, test_loss_y_recon, test_loss_y_recon_loglikelihood, test_loss_y_kldiv, test_corrected)
test_loss = np.mean(test_loss_all)
return model, test_loss, test_log
def test_TE(args, data_loader, model, plot_results=None, color_clf=None, split='test'):
model.eval()
loss_all = []
loss_recon = []
loss_recon_loglikelihood = []
loss_kldiv = []
loss_y_recon = []
loss_y_recon_loglikelihood = []
loss_y_kldiv = []
metric_I_z_yout_given_c = []
metric_I_z_x_given_c = []
output_metric_I_z_x_given_c = []
if args.color_clf:
color_accuracy = []
print('evaluate on split', split)
restack = True
with torch.no_grad():
for batch_idx, batch in enumerate(data_loader):
images_trgt, images_hist, labels_trgt = batch
images_trgt = images_trgt.to(device=args.device,dtype=torch.float)
images_hist = images_hist.to(device=args.device,dtype=torch.float)
if args.dataset_name == 'ColoredBouncingBallsStackedOnlinegen':
labels_trgt = labels_trgt.to(device=args.device,dtype=torch.float) #B,seq + seq_prediction,c,h,w
# elif args.dataset_name == 'FrequencyChangingSinesOnlinegen' or args.dataset_name == 'FrequencyChangingSinesSummedMultiple':
elif args.dataset_name == 'FrequencyChangingSinesSummedMultiple':
labels_trgt = labels_trgt.to(device=args.device,dtype=torch.float) #B,seq + seq_prediction,1
else:
labels_trgt = labels_trgt.to(device=args.device,dtype=torch.long)
labels_hist = labels_trgt[:,:images_hist.shape[1]]
labels_trgt = labels_trgt[:,[images_hist.shape[1]-1]]
model.zero_grad()
if args.output_categorical:
pred, kl_div, _, y_pred, y_kl_div, I_z_x_given_c = model(images_trgt[:,0], labels_hist[:,0], images_trgt, y_next_label = labels_trgt, stopgradient=args.y_stopgradient,deterministic=args.deterministic_baseline)
else:
pred, kl_div, _, y_pred, y_kl_div, I_z_x_given_c = model(labels_hist, images_hist, images_trgt, y_next_label = labels_trgt, stopgradient=args.y_stopgradient,deterministic=args.deterministic_baseline)
if args.output_categorical:
reconstructionloss,loglikelyhood = args.criterion(pred,labels_trgt[:,0])
elif args.output_seq_scalar:
reconstructionloss,loglikelyhood = args.criterion(pred,images_trgt)
else:
reconstructionloss,loglikelyhood = args.criterion(pred,images_trgt.view(images_trgt.shape[0]*images_trgt.shape[1],*images_trgt.shape[2:]))
if not args.true_latent_loss:
raise ValueError()
else:
loss = args.kappa*reconstructionloss + I_z_x_given_c # loglikelyhood = <log(d(y'|z,c))> , kl_div=Rate=<log(e(z|x,c))>-<log(b(z|y',c))>. Rate indicates how many bits to the MNI point assuming the optimal d, and loglikelihood bounds I(Z,Y'|C)
if args.Y_continuetrain:
if args.output_categorical:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred,labels_trgt[:,0])
elif args.output_seq_scalar:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred,images_trgt)
else:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred, images_trgt.view(images_trgt.shape[0]*images_trgt.shape[1],*images_trgt.shape[2:]))
y_loss = args.kappa_Y*y_reconstructionloss + y_kl_div # loglikelyhood = <log(d(y'|z,c))> , kl_div=Rate=<log(e(z|x,c))>-<log(b(z|y',c))>. Rate indicates how many bits to the MNI point assuming the optimal d, and loglikelihood bounds I(Z,Y'|C)
loss = loss + y_loss
#information metrics
if not args.Y_continuetrain:
if args.output_categorical:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred,labels_trgt[:,0])
elif args.output_seq_scalar:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred,images_trgt)
else:
y_reconstructionloss,y_loglikelyhood = args.criterion(y_pred, images_trgt.view(images_trgt.shape[0]*images_trgt.shape[1],*images_trgt.shape[2:]))
I_z_yout_given_c, output_I_z_x_given_c = model.info_metrics(reconstruction_loglikelihood=loglikelyhood, reconstruction_loglikelihood_y=y_loglikelyhood, kl_div=kl_div)
if not (color_clf == None):
if args.plot_sigmoid:
pred_color = color_clf(torch.sigmoid(pred))
else:
pred_color = color_clf(pred)
trgt_color = color_clf(images_trgt.view(images_trgt.shape[0]*images_trgt.shape[1],*images_trgt.shape[2:]))
_, pred_predicted = torch.max(pred_color, 1)
_, trgt_predicted = torch.max(trgt_color, 1)
# print('idx', batch_idx, pred_predicted, trgt_predicted)
correct = (pred_predicted == trgt_predicted).float().detach().cpu().numpy().tolist()
color_accuracy += correct
loss_all.append(loss.item())
loss_recon.append(reconstructionloss.item())
loss_recon_loglikelihood.append(loglikelyhood.item())
loss_kldiv.append(kl_div.item())
loss_y_recon.append(y_reconstructionloss.item())
loss_y_recon_loglikelihood.append(y_loglikelyhood.item())
loss_y_kldiv.append(y_kl_div.item())
metric_I_z_yout_given_c.append(I_z_yout_given_c.item())
metric_I_z_x_given_c.append(I_z_x_given_c.item())
output_metric_I_z_x_given_c.append(output_I_z_x_given_c.item())
# plot
if ((batch_idx % 1) == 0) or (batch_idx == (len(data_loader)-1)):
plot_results(pred.detach().cpu().numpy()[0],
images_trgt.detach().cpu().numpy()[0],
images_hist.detach().cpu().numpy()[0],
labels_hist.detach().cpu().numpy()[0], f'{batch_idx}', path=f'{args.log_dir}/{args.exp_name}_{args.seed}_forPlotting/run_plots/{split}_plots/',save=args.savefig,sigmoid=args.plot_sigmoid, plot_shifted_pixel=True)
if restack:
pred_stack = copy.deepcopy(pred.detach().cpu().numpy())
images_trgt_stack = copy.deepcopy(images_trgt.detach().cpu().numpy())
images_hist_stack = copy.deepcopy(images_hist.detach().cpu().numpy())
labels_hist_stack = copy.deepcopy(labels_hist.detach().cpu().numpy())
restack = False
else:
pred_stack = np.concatenate((pred_stack, pred.detach().cpu().numpy()), 0)
images_trgt_stack = np.concatenate((images_trgt_stack, images_trgt.detach().cpu().numpy()), 0)
images_hist_stack = np.concatenate((images_hist_stack, images_hist.detach().cpu().numpy()), 0)
labels_hist_stack = np.concatenate((labels_hist_stack, labels_hist.detach().cpu().numpy()), 0)
del loss, pred, kl_div, _, y_pred, y_kl_div, reconstructionloss,loglikelyhood, y_reconstructionloss,y_loglikelyhood
# congregate multiple samples to show a big images
if ((batch_idx % 10) == 9) or (batch_idx == (len(data_loader)-1)):
plot_results(pred_stack, images_trgt_stack, images_hist_stack,
labels_hist_stack, f'{batch_idx}', path=f'{args.log_dir}/{args.exp_name}_{args.seed}_forPlotting/run_plots/{split}_plots/',save=args.savefig,sigmoid=args.plot_sigmoid, plot_shifted_pixel=True, has_batch_first=True)
restack = True
pred_stack = None
images_trgt_stack = None
images_hist_stack = None
images_hist_stack = None
if args.save:
torch.save((loss_all,loss_recon,loss_recon_loglikelihood,loss_kldiv,loss_y_recon,loss_y_recon_loglikelihood,loss_y_kldiv,metric_I_z_yout_given_c,metric_I_z_x_given_c,output_metric_I_z_x_given_c),f'{args.log_dir}/{args.exp_name}_{args.seed}_forPlotting/TE_module_Info_{split}_stats.pkl')
print(f'{split} loss', f'loss is: {np.mean(loss_all)}',f'reconstructionloss is: {np.mean(loss_recon)}','recon_loglikelihood', np.mean(loss_recon_loglikelihood), 'kl', np.mean(loss_kldiv))
print(f'Y_reconstructionloss is: {np.mean(loss_y_recon)}','Y_recon_loglikelihood', np.mean(loss_y_recon_loglikelihood), 'Y_kl', np.mean(loss_y_kldiv))
print(f'metrics are: I(Z,Y_prime|C) {I_z_yout_given_c}, and I(X,Z|C) {I_z_x_given_c}; calculated at the output I(X,Z|C) is {output_I_z_x_given_c}')
if args.color_clf:
print(f'color accuracy is {100.*np.mean(color_accuracy)}')
if args.color_clf:
return loss_all, loss_recon, loss_recon_loglikelihood, loss_kldiv, loss_y_recon, loss_y_recon_loglikelihood, loss_y_kldiv, color_accuracy
else:
return loss_all, loss_recon, loss_recon_loglikelihood, loss_kldiv, loss_y_recon, loss_y_recon_loglikelihood, loss_y_kldiv
if __name__ == '__main__':
parser = argparse.ArgumentParser()
projectdir = os.path.dirname(os.path.abspath(__file__))
device = 'cuda' if torch.cuda.is_available() else 'cpu'
parser.add_argument(
'--projectdir',
type=str,
default=projectdir,
help='directory to this project')
parser.add_argument(
'--log_dir',
type=str,
default=os.path.join(projectdir,'run_outputs'),
help='directory of the log')
parser.add_argument(
'--config_file',
type=str,
default='arguments.yaml',
help='name of config file yaml')
parser.add_argument(
'--seed',
type=int,
default=0,
metavar='seed',
help='random seed, default 0')
parser.add_argument(
'--device',
type=str,
default=device)
parser.add_argument(
'--save',
type=str2bool,
default=True,
help='save checkpoints or not')
parser.add_argument(
'--savefig',
type=str2bool,
default=True,
help='save plots or not')
parser.add_argument(
'--parallel',
type=str2bool,
default=False,
help='enable model in parallel or not')
parser.add_argument(
'--y_stopgradient',
type=str2bool,
default=True,
help='set stopgradient to true to stop gradient flow to Y_model through the latent state c')
parser.add_argument(
'--Y_continuetrain',
type=str2bool,
default=False,
help = 'continue to train the Y_model (with its usual objetive) when training the full TE model')
parser.add_argument(
'--Y_checkpoint',
type=int,
default=-1,
help = 'epoch to load the Y module and optimizer from, and start at this epoch if training Y')
parser.add_argument(
'--Y_checkpoint_foldername',
type=str,
default='',
help = 'folder to load Y module from, if empty string then uses same folder as TE')
parser.add_argument(
'--TE_checkpoint',
type=int,
default=-1,
help = 'epoch to load the full TE module and optimizer from, and start at this epoch if training TE')
parser.add_argument(
'--TE_checkpoint_foldername',
type=str,
default='',
help = 'folder to load the full TE module and optimizer from, and start at this epoch if training TE')
ap_args = parser.parse_args()
args = getStructuredArgs(f'./{ap_args.config_file}', ap_args)
if args.output_categorical:
args.criterion = TargetLoss(output_type = 'categorical',domain_shape=args.TE_module_args_dict['X_module_args_dict']['input_dim'],presumed_variance=args.presumed_output_variance)
elif args.output_seq_scalar:
args.criterion = TargetLoss(output_type = args.loss_type,domain_shape=args.signal_shape,presumed_variance=args.presumed_output_variance)
else:
args.criterion = TargetLoss(output_type = args.loss_type,domain_shape=args.image_shape,presumed_variance=args.presumed_output_variance)
if args.loss_type == 'binary':
args.plot_sigmoid = True
else:
args.plot_sigmoid = False
if args.output_categorical:
args.normalizing_factor_loglikelihood = 1
elif args.output_seq_scalar:
args.normalizing_factor_loglikelihood = np.prod(args.signal_shape)
else:
args.normalizing_factor_loglikelihood = np.prod(args.image_shape)
args.kappa_Y = args.normalizing_factor_loglikelihood*args.beta_Y
args.kappa = args.normalizing_factor_loglikelihood*args.beta_TE
args.exp_name = str(args.exp_name)+'_'+str(args.seed)
# print arguments
for arg_name in vars(args):
print(arg_name, ': ', getattr(args, arg_name))
torch.manual_seed(args.seed)
np.random.seed(args.seed)
if args.color_clf:
if 'g1_3' in args.testset_argu['directory']:
args.color_clf_ckpt='ColorCLF.ckpt'
else:
raise ValueError('dataset folder is expected to have g1_3 in it')
print(f'Load color classifier from {args.color_clf_ckpt}')
args_path = f'{args.log_dir}/{args.exp_name}/args.ckpt'
seed_list = [1]
total_corrected = []
assert args.TE_checkpoint > -1.
for test_seed in seed_list:
args.seed = test_seed
torch.manual_seed(args.seed)
np.random.seed(args.seed)
print('test seed', args.seed)
TE_model, test_loss, test_log = main_TE(args)
total_corrected += test_log[-1]
print(f'Testing loss on TE model is {test_loss}')
print('accuracy across seed list', 100.*np.mean(total_corrected))