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package hdf5
import (
"fmt"
"os"
"path/filepath"
"testing"
"github.com/scigolib/hdf5/internal/core"
"github.com/stretchr/testify/assert"
"github.com/stretchr/testify/require"
)
// ---------------------------------------------------------------------------
// Section 1: loadObject coverage -- exercise all object-type branches
// ---------------------------------------------------------------------------
// TestLoadObject_DatasetFromV0File verifies that loadObject correctly
// resolves dataset objects in a v0 superblock file. This covers the
// ObjectTypeDataset branch within loadObject.
func TestLoadObject_DatasetFromV0File(t *testing.T) {
t.Parallel()
// fill_old.h5 is a v0 superblock file with datasets at root level.
f, err := Open("testdata/reference/fill_old.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion(), "expected v0 superblock")
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.GreaterOrEqual(t, len(children), 2, "fill_old.h5 should have at least 2 children")
// Verify at least one child is a Dataset.
foundDataset := false
for _, child := range children {
if ds, ok := child.(*Dataset); ok {
foundDataset = true
require.NotEmpty(t, ds.Name())
require.NotZero(t, ds.Address(), "dataset address should be non-zero")
}
}
require.True(t, foundDataset, "should find at least one Dataset in fill_old.h5")
}
// TestLoadObject_GroupFromV0File verifies that loadObject correctly
// resolves nested group objects in a v0 superblock file. This covers the
// ObjectTypeGroup branch within loadObject, plus the fallback through
// ObjectTypeUnknown for v0 groups.
func TestLoadObject_GroupFromV0File(t *testing.T) {
t.Parallel()
// group_old.h5 is a v0 superblock file with a nested group "/old".
f, err := Open("testdata/reference/group_old.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Len(t, children, 1, "group_old.h5 should have exactly 1 child")
childGroup, ok := children[0].(*Group)
require.True(t, ok, "child should be a Group")
require.Contains(t, childGroup.Name(), "old")
}
// TestLoadObject_NestedGroupsV0 verifies loadObject with deeply nested
// groups in a v0 file. tbogus.h5 has /group/ with child datasets, exercising
// loadChildren with TREE B-tree format and multiple entries.
func TestLoadObject_NestedGroupsV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/tbogus.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
// Walk the file and collect all paths.
var paths []string
var groupCount, datasetCount int
f.Walk(func(path string, obj Object) {
paths = append(paths, path)
switch obj.(type) {
case *Group:
groupCount++
case *Dataset:
datasetCount++
}
})
// tbogus.h5 has root(6 children) + /group/(5 children) = 2 groups, 10 datasets.
require.GreaterOrEqual(t, groupCount, 2, "should have at least 2 groups")
require.GreaterOrEqual(t, datasetCount, 5, "should have at least 5 datasets")
require.Equal(t, "/", paths[0], "first path should be root")
}
// TestLoadObject_ManyDatasetsV0 verifies loadChildren with a large number
// of children. le_data.h5 has 24 datasets at root level in v0 format.
func TestLoadObject_ManyDatasetsV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/le_data.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Equal(t, 24, len(children), "le_data.h5 should have 24 children")
// Verify all children are Datasets.
for _, child := range children {
ds, ok := child.(*Dataset)
require.True(t, ok, "all children should be Datasets, got %T for %q", child, child.Name())
require.NotEmpty(t, ds.Name())
}
}
// TestLoadObject_MultipleGroupsV0 verifies loadObject for v0 files
// containing multiple group children. mergemsg.h5 has /grp1, /grp2, /grp3.
func TestLoadObject_MultipleGroupsV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/mergemsg.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Equal(t, 3, len(children), "mergemsg.h5 should have 3 children")
// Verify all children are Groups.
groupNames := make(map[string]bool)
for _, child := range children {
g, ok := child.(*Group)
require.True(t, ok, "all children should be Groups")
groupNames[g.Name()] = true
}
require.True(t, groupNames["grp1"], "should have grp1")
require.True(t, groupNames["grp2"], "should have grp2")
require.True(t, groupNames["grp3"], "should have grp3")
}
// ---------------------------------------------------------------------------
// Section 2: loadChildren coverage -- more branch paths through B-tree
// ---------------------------------------------------------------------------
// TestLoadChildren_V0WithBigEndian verifies loadChildren on a big-endian
// v0 file with many datasets (be_data.h5).
func TestLoadChildren_V0WithBigEndian(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/be_data.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Equal(t, 24, len(children), "be_data.h5 should have 24 children")
}
// TestLoadChildren_V0WithDeflate verifies loadChildren correctly
// identifies Dataset objects in v0 files with compressed data.
func TestLoadChildren_V0WithDeflate(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/deflate.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Equal(t, 1, len(children))
ds, ok := children[0].(*Dataset)
require.True(t, ok, "child should be Dataset")
require.Equal(t, "Dataset1", ds.Name())
}
// ---------------------------------------------------------------------------
// Section 3: Dataset reading API coverage (read path from group.go)
// ---------------------------------------------------------------------------
// TestDatasetRead_Float64FromV0 tests Dataset.Read() on a v0 file.
// This exercises the Read() method through loadObject.
func TestDatasetRead_Float64FromV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/filespace_1_8.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
data, err := ds.Read()
require.NoError(t, err)
require.Len(t, data, 100, "filespace_1_8 dataset has 100 elements")
}
// TestDatasetInfo_FromV0 tests Dataset.Info() method.
func TestDatasetInfo_FromV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/filespace_1_8.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
info, err := ds.Info()
require.NoError(t, err)
require.NotEmpty(t, info, "dataset info should not be empty")
assert.Contains(t, info, "integer", "should describe integer type")
}
// TestDatasetAttributes_FromV0 tests Dataset.Attributes() and
// ListAttributes() on a dataset. specmetaread.h5 has datasets at root.
func TestDatasetAttributes_FromV0(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/specmetaread.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.GreaterOrEqual(t, len(children), 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
// Attributes() may return nil for datasets without attributes (v0 files).
attrs, err := ds.Attributes()
require.NoError(t, err, "Attributes() should not error even if no attrs")
names, err := ds.ListAttributes()
require.NoError(t, err, "ListAttributes() should not error even if no attrs")
// If attrs is nil, len should be 0.
require.Equal(t, len(attrs), len(names),
"Attributes and ListAttributes should return same count")
}
// TestDatasetReadAttribute_NotFound tests Dataset.ReadAttribute() with
// a non-existent attribute name.
func TestDatasetReadAttribute_NotFound(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/specmetaread.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.GreaterOrEqual(t, len(children), 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
_, err = ds.ReadAttribute("nonexistent_attribute_xyz")
require.Error(t, err, "ReadAttribute should fail for non-existent attribute")
assert.Contains(t, err.Error(), "not found")
}
// ---------------------------------------------------------------------------
// Section 4: Group.Attributes() coverage -- both modern and traditional paths
// ---------------------------------------------------------------------------
// TestGroupAttributes_ModernGroup tests Group.Attributes() on modern
// v2 format groups that have stored address (non-zero).
func TestGroupAttributes_ModernGroup(t *testing.T) {
t.Parallel()
f, err := Open("testdata/with_groups.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
// Root group has non-zero address in v2 files.
attrs, err := root.Attributes()
require.NoError(t, err)
require.NotNil(t, attrs, "Attributes() should return non-nil slice")
// Walk and check subgroups too.
f.Walk(func(path string, obj Object) {
if g, ok := obj.(*Group); ok {
attrs, err := g.Attributes()
require.NoError(t, err, "Attributes() should not error for group %s", path)
require.NotNil(t, attrs)
}
})
}
// TestGroupAttributes_TraditionalV0Group tests Group.Attributes() on
// a v0 traditional format group where address may be 0 (SNOD format).
func TestGroupAttributes_TraditionalV0Group(t *testing.T) {
t.Parallel()
f, err := Open("testdata/reference/group_old.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
require.NotNil(t, root)
// Root group in v0 files -- Attributes() should return empty slice or
// attributes from the object header.
attrs, err := root.Attributes()
require.NoError(t, err)
require.NotNil(t, attrs, "Attributes() should return non-nil slice even for v0")
}
// ---------------------------------------------------------------------------
// Section 5: Write-path coverage -- round-trip tests for group/dataset/attrs
// ---------------------------------------------------------------------------
// TestWriteReadRoundTrip_MixedObjectTypes verifies write -> read -> verify
// for files with mixed groups and datasets. This exercises loadObject for
// ObjectTypeGroup and ObjectTypeDataset branches in the write-created files.
func TestWriteReadRoundTrip_MixedObjectTypes(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_mixed.h5")
// Write file with mixed structure.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
// Create groups.
_, err = fw.CreateGroup("/sensors")
require.NoError(t, err)
_, err = fw.CreateGroup("/sensors/temperature")
require.NoError(t, err)
_, err = fw.CreateGroup("/metadata")
require.NoError(t, err)
// Create datasets in different locations.
ds1, err := fw.CreateDataset("/sensors/temperature/readings", Float64, []uint64{5})
require.NoError(t, err)
require.NoError(t, ds1.Write([]float64{20.1, 20.5, 21.0, 20.8, 20.3}))
ds2, err := fw.CreateDataset("/sensors/humidity", Float32, []uint64{3})
require.NoError(t, err)
require.NoError(t, ds2.Write([]float32{45.0, 46.5, 48.0}))
ds3, err := fw.CreateDataset("/metadata/version", Int32, []uint64{1})
require.NoError(t, err)
require.NoError(t, ds3.Write([]int32{42}))
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
var groups, datasets int
f.Walk(func(_ string, obj Object) {
switch obj.(type) {
case *Group:
groups++
case *Dataset:
datasets++
}
})
require.Equal(t, 4, groups, "should have root + sensors + sensors/temperature + metadata")
require.Equal(t, 3, datasets, "should have 3 datasets")
}
// TestWriteReadRoundTrip_V0FileOnly creates a v0 format empty file
// and verifies it can be reopened. V0 with datasets uses the symbol table
// format which is not fully supported for write->reopen, but the empty
// file round-trip exercises the v0 superblock and root group paths.
func TestWriteReadRoundTrip_V0FileOnly(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_v0.h5")
// Write empty v0 file.
func() {
fw, err := CreateForWrite(filename, CreateTruncate, WithSuperblockVersion(core.Version0))
require.NoError(t, err)
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
require.Equal(t, uint8(0), f.SuperblockVersion())
root := f.Root()
require.NotNil(t, root)
require.Equal(t, "/", root.Name())
// Empty file should have no children.
children := root.Children()
require.Empty(t, children, "empty v0 file should have 0 children")
}
// TestWriteReadRoundTrip_V2WithGroupsAndDatasets creates a v2 format
// file with nested groups and datasets, covering loadObject, loadModernGroup,
// and loadChildren thoroughly via write -> read -> verify.
func TestWriteReadRoundTrip_V2WithGroupsAndDatasets(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_v2_nested.h5")
// Write.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
_, err = fw.CreateGroup("/grp")
require.NoError(t, err)
ds, err := fw.CreateDataset("/grp/values", Int32, []uint64{3})
require.NoError(t, err)
require.NoError(t, ds.Write([]int32{10, 20, 30}))
ds2, err := fw.CreateDataset("/data", Float64, []uint64{2})
require.NoError(t, err)
require.NoError(t, ds2.Write([]float64{1.5, 2.5}))
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
var groups, datasets int
var paths []string
f.Walk(func(path string, obj Object) {
paths = append(paths, path)
switch obj.(type) {
case *Group:
groups++
case *Dataset:
datasets++
}
})
require.GreaterOrEqual(t, groups, 2, "should have root + grp")
require.GreaterOrEqual(t, datasets, 2, "should have data + grp/values")
require.Equal(t, "/", paths[0], "first path should be root")
}
// ---------------------------------------------------------------------------
// Section 6: RebalanceAttributeBTree -- test the objectHeader != nil path
// ---------------------------------------------------------------------------
// TestRebalanceAttributeBTree_DenseViaReadHeader tests the code path
// in RebalanceAttributeBTree where denseAttrInfo==nil but objectHeader==nil,
// so it reads the object header from disk. We create a file with 10+ attrs
// (triggers dense storage), close it, reopen it fresh, and call
// RebalanceAttributeBTree.
func TestRebalanceAttributeBTree_DenseViaReadHeader(t *testing.T) {
t.Parallel()
// Use explicit file path with defer Remove to avoid TempDir cleanup race.
filename := filepath.Join("tmp", "test_rebalance_read_header.h5")
defer func() { _ = os.Remove(filename) }()
// Step 1: Create file with dense attributes.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
ds, err := fw.CreateDataset("/data", Float64, []uint64{5})
require.NoError(t, err)
require.NoError(t, ds.Write([]float64{1, 2, 3, 4, 5}))
// Add 10 attributes to trigger dense storage.
for i := 0; i < 10; i++ {
err = ds.WriteAttribute(fmt.Sprintf("attr_%d", i), int32(i))
require.NoError(t, err)
}
// The dataset was created in this session, so denseAttrInfo is nil
// and objectHeader is nil. This tests the fresh-read path.
err = ds.RebalanceAttributeBTree()
require.NoError(t, err, "RebalanceAttributeBTree should succeed on in-session dense dataset")
require.NoError(t, fw.Close())
}()
// Step 2: Reopen with OpenForWrite and test the cached path.
func() {
fw, err := OpenForWrite(filename, OpenReadWrite)
require.NoError(t, err)
ds, err := fw.OpenDataset("/data")
require.NoError(t, err)
// denseAttrInfo should be set now (cached from OpenDataset).
err = ds.RebalanceAttributeBTree()
require.NoError(t, err, "RebalanceAttributeBTree should succeed on reopened dataset with cached header")
require.NoError(t, fw.Close())
}()
// Step 3: Verify file is still valid after rebalancing.
f, err := Open(filename)
require.NoError(t, err)
root := f.Root()
require.NotNil(t, root)
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
attrs, err := ds.Attributes()
require.NoError(t, err)
require.Len(t, attrs, 10, "should still have 10 attributes after rebalancing")
require.NoError(t, f.Close())
}
// TestRebalanceAttributeBTree_CompactOnly tests RebalanceAttributeBTree
// on a dataset with only compact attributes (less than 8). The code should
// find attrInfo==nil and return nil (no-op).
func TestRebalanceAttributeBTree_CompactOnly(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_rebalance_compact.h5")
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
ds, err := fw.CreateDataset("/data", Float64, []uint64{3})
require.NoError(t, err)
require.NoError(t, ds.Write([]float64{1, 2, 3}))
// Add only 3 attributes (compact storage).
for i := 0; i < 3; i++ {
err = ds.WriteAttribute(fmt.Sprintf("compact_%d", i), int32(i))
require.NoError(t, err)
}
// RebalanceAttributeBTree should be a no-op.
err = ds.RebalanceAttributeBTree()
require.NoError(t, err, "should succeed (no-op) for compact storage")
}
// ---------------------------------------------------------------------------
// Section 7: Dataset attribute write/read round-trip with all scalar types
// ---------------------------------------------------------------------------
// TestAttributeWriteRead_AllScalarTypes verifies round-trip for all
// supported scalar attribute types. This increases coverage for
// inferDatatypeFromValue, encodeAttributeValue, and writeCompactAttribute.
func TestAttributeWriteRead_AllScalarTypes(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_attr_scalars.h5")
tests := []struct {
name string
value interface{}
}{
{"int8", int8(42)},
{"int16", int16(1234)},
{"int32", int32(100000)},
{"int64", int64(9876543210)},
{"uint8", uint8(255)},
{"uint16", uint16(65535)},
{"uint32", uint32(4294967295)},
{"uint64", uint64(18446744073709551615)},
{"float32", float32(3.14)},
{"float64", float64(2.71828)},
{"string", "hello_hdf5"},
}
// Write.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
ds, err := fw.CreateDataset("/data", Float64, []uint64{1})
require.NoError(t, err)
require.NoError(t, ds.Write([]float64{0.0}))
for _, tt := range tests {
err = ds.WriteAttribute(tt.name, tt.value)
require.NoError(t, err, "WriteAttribute failed for %s", tt.name)
}
require.NoError(t, fw.Close())
}()
// Read and verify attributes exist.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
attrs, err := ds.Attributes()
require.NoError(t, err)
// Compact storage holds up to 7. Since we have 11 attributes, dense storage kicks in at 8.
require.Len(t, attrs, len(tests), "should have all %d attributes", len(tests))
}
// TestAttributeWriteRead_SliceTypes verifies round-trip for all
// supported slice attribute types.
func TestAttributeWriteRead_SliceTypes(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_attr_slices.h5")
tests := []struct {
name string
value interface{}
}{
{"int8_slice", []int8{-1, 0, 1}},
{"int16_slice", []int16{-100, 0, 100}},
{"int32_slice", []int32{1, 2, 3}},
{"int64_slice", []int64{100, 200, 300}},
{"uint8_slice", []uint8{0, 128, 255}},
{"uint16_slice", []uint16{0, 1000, 65535}},
{"uint32_slice", []uint32{0, 1000000, 4294967295}},
{"uint64_slice", []uint64{0, 1, 2}},
{"float32_slice", []float32{1.0, 2.0, 3.0}},
{"float64_slice", []float64{1.1, 2.2, 3.3}},
}
// Write.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
ds, err := fw.CreateDataset("/data", Float64, []uint64{1})
require.NoError(t, err)
require.NoError(t, ds.Write([]float64{0.0}))
for _, tt := range tests {
err = ds.WriteAttribute(tt.name, tt.value)
require.NoError(t, err, "WriteAttribute failed for %s", tt.name)
}
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
attrs, err := ds.Attributes()
require.NoError(t, err)
require.Len(t, attrs, len(tests))
}
// ---------------------------------------------------------------------------
// Section 8: inferDatatypeFromValue edge cases
// ---------------------------------------------------------------------------
// TestInferDatatypeFromValue_Nil tests nil value handling.
func TestInferDatatypeFromValue_Nil(t *testing.T) {
t.Parallel()
_, _, err := inferDatatypeFromValue(nil)
require.Error(t, err)
assert.Contains(t, err.Error(), "nil or invalid")
}
// TestInferDatatypeFromValue_UnsupportedSlice tests unsupported slice
// element type.
func TestInferDatatypeFromValue_UnsupportedSlice(t *testing.T) {
t.Parallel()
_, _, err := inferDatatypeFromValue([]bool{true, false})
require.Error(t, err)
assert.Contains(t, err.Error(), "unsupported")
}
// TestEncodeAttributeValue_UnsupportedType tests encoding unsupported type.
func TestEncodeAttributeValue_UnsupportedType(t *testing.T) {
t.Parallel()
_, err := encodeAttributeValue(struct{}{})
require.Error(t, err)
assert.Contains(t, err.Error(), "unsupported")
}
// TestEncodeSliceValue_UnsupportedElemType tests encoding slice with
// unsupported element type.
func TestEncodeSliceValue_UnsupportedElemType(t *testing.T) {
t.Parallel()
_, _, err := inferDatatypeFromValue([]complex64{1 + 2i})
require.Error(t, err)
assert.Contains(t, err.Error(), "unsupported")
}
// ---------------------------------------------------------------------------
// Section 9: loadGroup -- edge case: invalid group address
// ---------------------------------------------------------------------------
// TestLoadGroup_InvalidAddress tests that loadGroup returns an error
// for address 0.
func TestLoadGroup_InvalidAddress(t *testing.T) {
t.Parallel()
// Create a minimal file to get a File handle.
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_invalid_addr.h5")
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
require.NoError(t, fw.Close())
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
// Call loadGroup with address 0 -- should fail.
_, err = loadGroup(f, 0)
require.Error(t, err)
assert.Contains(t, err.Error(), "invalid group address")
}
// ---------------------------------------------------------------------------
// Section 10: Dataset reading methods -- additional coverage
// ---------------------------------------------------------------------------
// TestDatasetReadStrings_WriteRead verifies Dataset.ReadStrings()
// via a write-read round trip.
func TestDatasetReadStrings_WriteRead(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_strings.h5")
// Write string dataset.
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
ds, err := fw.CreateDataset("/labels", String, []uint64{3}, WithStringSize(16))
require.NoError(t, err)
require.NoError(t, ds.Write([]string{"alpha", "beta", "gamma"}))
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
strings, err := ds.ReadStrings()
require.NoError(t, err)
require.Len(t, strings, 3)
assert.Equal(t, "alpha", strings[0])
assert.Equal(t, "beta", strings[1])
assert.Equal(t, "gamma", strings[2])
}
// TestDatasetReadCompound_WriteRead verifies Dataset.ReadCompound().
func TestDatasetReadCompound_WriteRead(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
filename := filepath.Join(tempDir, "test_compound.h5")
// Write compound dataset using the correct API (raw bytes).
func() {
fw, err := CreateForWrite(filename, CreateTruncate)
require.NoError(t, err)
defer func() { _ = fw.Close() }()
// Create compound type: struct { float64 x; float64 y }
f64Type, err := core.CreateBasicDatatypeMessage(core.DatatypeFloat, 8)
require.NoError(t, err)
fields := []core.CompoundFieldDef{
{Name: "x", Offset: 0, Type: f64Type},
{Name: "y", Offset: 8, Type: f64Type},
}
compoundType, err := core.CreateCompoundTypeFromFields(fields)
require.NoError(t, err)
ds, err := fw.CreateCompoundDataset("/points", compoundType, []uint64{2})
require.NoError(t, err)
// Write 2 records: {x:1.0, y:2.0}, {x:3.0, y:4.0}
// IEEE 754 LE: 1.0=3FF0..., 2.0=4000..., 3.0=4008..., 4.0=4010...
data := []byte{
0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0xF0, 0x3F, // x=1.0
0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x40, // y=2.0
0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x08, 0x40, // x=3.0
0x00, 0x00, 0x00, 0x00, 0x00, 0x00, 0x10, 0x40, // y=4.0
}
require.NoError(t, ds.WriteRaw(data))
require.NoError(t, fw.Close())
}()
// Read and verify.
f, err := Open(filename)
require.NoError(t, err)
defer func() { _ = f.Close() }()
root := f.Root()
children := root.Children()
require.Len(t, children, 1)
ds, ok := children[0].(*Dataset)
require.True(t, ok)
values, err := ds.ReadCompound()
require.NoError(t, err)
require.Len(t, values, 2)
// Verify field values.
require.Contains(t, values[0], "x")
require.Contains(t, values[0], "y")
}
// ---------------------------------------------------------------------------
// Section 11: NamedDatatype coverage
// ---------------------------------------------------------------------------
// TestNamedDatatype_Methods tests Name() and Datatype() methods.
func TestNamedDatatype_Methods(t *testing.T) {
t.Parallel()
ndt := &NamedDatatype{
name: "test_type",
address: 0x1234,
datatype: &core.DatatypeMessage{
Class: core.DatatypeFixed,
Size: 4,
},
}
require.Equal(t, "test_type", ndt.Name())
require.NotNil(t, ndt.Datatype())
require.Equal(t, core.DatatypeFixed, ndt.Datatype().Class)
require.Equal(t, uint32(4), ndt.Datatype().Size)
}
// ---------------------------------------------------------------------------
// Section 12: File.Open error paths
// ---------------------------------------------------------------------------
// TestOpen_ErrorPaths tests various error conditions for Open().
func TestOpen_ErrorPaths(t *testing.T) {
t.Parallel()
t.Run("non-existent file", func(t *testing.T) {
t.Parallel()
_, err := Open("testdata/does_not_exist_test.h5")
require.Error(t, err)
})
t.Run("not an HDF5 file", func(t *testing.T) {
t.Parallel()
// Use this test file itself as input -- it is not HDF5.
_, err := Open("api_coverage_test.go")
require.Error(t, err)
assert.Contains(t, err.Error(), "not an HDF5 file")
})
t.Run("empty file", func(t *testing.T) {
t.Parallel()
tempDir := t.TempDir()
emptyFile := filepath.Join(tempDir, "empty.h5")
require.NoError(t, os.WriteFile(emptyFile, []byte{}, 0o644))
_, err := Open(emptyFile)
require.Error(t, err)
})
}
// ---------------------------------------------------------------------------
// Section 13: Walk with NamedDatatype (ensure Walk handles it)
// ---------------------------------------------------------------------------
// TestWalkWithAllObjectTypes exercises Walk with groups, datasets,
// and verifies object type assertion works for mixed structures.
func TestWalkWithAllObjectTypes(t *testing.T) {
t.Parallel()
f, err := Open("testdata/with_groups.h5")
require.NoError(t, err)
defer func() { _ = f.Close() }()
groupPaths := make(map[string]bool)
datasetPaths := make(map[string]bool)
allPaths := make([]string, 0)
f.Walk(func(path string, obj Object) {
allPaths = append(allPaths, path)
switch obj.(type) {
case *Group:
groupPaths[path] = true
case *Dataset:
datasetPaths[path] = true
}
})
// with_groups.h5 structure:
// / (root)
// dataset1
// subgroup/
// dataset2
// nested_group/
// nested_data
require.True(t, groupPaths["/"], "root should be visited")
require.Len(t, allPaths, 6, "should visit all 6 objects")
require.Equal(t, 3, len(groupPaths), "should have 3 groups")
require.Equal(t, 3, len(datasetPaths), "should have 3 datasets")
}
// ---------------------------------------------------------------------------
// Section 14: Additional V0 file coverage
// ---------------------------------------------------------------------------
// TestV0Files_TableDriven runs through multiple v0 reference files
// to ensure they all load correctly and objects resolve.
func TestV0Files_TableDriven(t *testing.T) {
t.Parallel()
tests := []struct {
name string
file string