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New macse refinealignment #19201

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New macse refinealignment

New macse refinealignment #19201

Triggered via pull request March 25, 2026 08:18
@takiifujita-uitakiifujita-ui
synchronize #10586
new_macse_refinealignment
Status Success
Total duration 2m 35s
Artifacts –

lint.yml

on: pull_request
nf-core-changes
12s
nf-core-changes
pre-commit
1m 36s
pre-commit
Matrix: nf-core lint modules
Matrix: nf-core lint subworkflows
confirm-pass-lint
6s
confirm-pass-lint
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5 warnings
pre-commit
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
pre-commit
Input 'extra_args' has been deprecated with message: The extra_args input has been renamed to extra-args. Update your workflow.
pre-commit
Checksum is not known for 0.3.8:prek-x86_64-unknown-linux-gnu.tar.gz; skipping verification for prek 0.3.8
pre-commit
Input 'extra_args' has been deprecated with message: The extra_args input has been renamed to extra-args. Update your workflow.
nf-core lint modules (macse/refinealignment)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/