From 80dd3c61017693d1575681ee9cd71785d47870f4 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 1 Dec 2025 19:24:05 +0000
Subject: [PATCH 1/2] pre-commit autoupdate
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.12.11 → v0.14.7](https://github.com/astral-sh/ruff-pre-commit/compare/v0.12.11...v0.14.7)
- [github.com/pre-commit/mirrors-mypy: v1.17.1 → v1.19.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.17.1...v1.19.0)
- [github.com/MarcoGorelli/cython-lint: v0.16.7 → v0.18.1](https://github.com/MarcoGorelli/cython-lint/compare/v0.16.7...v0.18.1)
- [github.com/adamchainz/blacken-docs: 1.19.1 → 1.20.0](https://github.com/adamchainz/blacken-docs/compare/1.19.1...1.20.0)
- [github.com/igorshubovych/markdownlint-cli: v0.45.0 → v0.46.0](https://github.com/igorshubovych/markdownlint-cli/compare/v0.45.0...v0.46.0)
- [github.com/kynan/nbstripout: 0.8.1 → 0.8.2](https://github.com/kynan/nbstripout/compare/0.8.1...0.8.2)
- [github.com/RobertCraigie/pyright-python: v1.1.404 → v1.1.407](https://github.com/RobertCraigie/pyright-python/compare/v1.1.404...v1.1.407)
---
 .pre-commit-config.yaml | 14 +++++++-------
 1 file changed, 7 insertions(+), 7 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index dfe603b..0c2f2bf 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -8,7 +8,7 @@ ci:
 
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.12.11
+    rev: v0.14.7
     hooks:
       - id: ruff
         args: [--fix, --unsafe-fixes]
@@ -22,7 +22,7 @@ repos:
       - id: trailing-whitespace
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.17.1
+    rev: v1.19.0
     hooks:
       - id: mypy
 
@@ -36,19 +36,19 @@ repos:
         exclude: src/pymatgen/analysis/aflow_prototypes.json
 
   - repo: https://github.com/MarcoGorelli/cython-lint
-    rev: v0.16.7
+    rev: v0.18.1
     hooks:
       - id: cython-lint
         args: [--no-pycodestyle]
       - id: double-quote-cython-strings
 
   - repo: https://github.com/adamchainz/blacken-docs
-    rev: 1.19.1
+    rev: 1.20.0
     hooks:
       - id: blacken-docs
 
   - repo: https://github.com/igorshubovych/markdownlint-cli
-    rev: v0.45.0
+    rev: v0.46.0
     hooks:
       - id: markdownlint
         # MD013: line too long
@@ -59,12 +59,12 @@ repos:
         args: [--disable, MD013, MD024, MD025, MD033, MD041, "--"]
 
   - repo: https://github.com/kynan/nbstripout
-    rev: 0.8.1
+    rev: 0.8.2
     hooks:
       - id: nbstripout
         args: [--drop-empty-cells, --keep-output]
 
   - repo: https://github.com/RobertCraigie/pyright-python
-    rev: v1.1.404
+    rev: v1.1.407
     hooks:
       - id: pyright

From 8da1c50505d654180f0e0d6a011336b6494e0d3d Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 1 Dec 2025 19:25:19 +0000
Subject: [PATCH 2/2] pre-commit auto-fixes

---
 src/pymatgen/db/cli.py          | 2 +-
 src/pymatgen/db/creator.py      | 5 ++---
 src/pymatgen/db/matproj.py      | 1 -
 src/pymatgen/db/query_engine.py | 1 -
 4 files changed, 3 insertions(+), 6 deletions(-)

diff --git a/src/pymatgen/db/cli.py b/src/pymatgen/db/cli.py
index 2c1bcb6..4224eed 100644
--- a/src/pymatgen/db/cli.py
+++ b/src/pymatgen/db/cli.py
@@ -9,9 +9,9 @@
 import multiprocessing
 import sys
 
+from pymatgen.apps.borg.queen import BorgQueen
 from pymongo import ASCENDING, MongoClient
 
-from pymatgen.apps.borg.queen import BorgQueen
 from pymatgen.db import SETTINGS
 
 from .config import DBConfig, get_settings
diff --git a/src/pymatgen/db/creator.py b/src/pymatgen/db/creator.py
index bc7529d..1975811 100644
--- a/src/pymatgen/db/creator.py
+++ b/src/pymatgen/db/creator.py
@@ -21,8 +21,6 @@
 import numpy as np
 from monty.io import zopen
 from monty.json import MontyEncoder
-from pymongo import MongoClient
-
 from pymatgen.analysis.bond_valence import BVAnalyzer
 from pymatgen.analysis.local_env import VoronoiNN
 from pymatgen.analysis.structure_analyzer import oxide_type
@@ -34,6 +32,7 @@
 from pymatgen.io.cif import CifWriter
 from pymatgen.io.vasp import Incar, Kpoints, Oszicar, Outcar, Poscar, Potcar, Vasprun
 from pymatgen.symmetry.analyzer import SpacegroupAnalyzer
+from pymongo import MongoClient
 
 __author__ = "Shyue Ping Ong"
 __copyright__ = "Copyright 2012, The Materials Project"
@@ -587,7 +586,7 @@ def get_valid_paths(self, path):
         3. Directories containing vasp output with ".relax1" and ".relax2" are
            also considered as 2 parts of an aflow style run.
         """
-        (parent, subdirs, files) = path
+        (parent, subdirs, _files) = path
         if set(self.runs).intersection(subdirs):
             return [parent]
         if (
diff --git a/src/pymatgen/db/matproj.py b/src/pymatgen/db/matproj.py
index 7db4b41..6a3ad4c 100644
--- a/src/pymatgen/db/matproj.py
+++ b/src/pymatgen/db/matproj.py
@@ -9,7 +9,6 @@
 import itertools
 
 import pymongo
-
 from pymatgen.entries.computed_entries import ComputedStructureEntry
 from pymatgen.ext.matproj import MPRester
 
diff --git a/src/pymatgen/db/query_engine.py b/src/pymatgen/db/query_engine.py
index 0cb0530..6b93bfe 100644
--- a/src/pymatgen/db/query_engine.py
+++ b/src/pymatgen/db/query_engine.py
@@ -23,7 +23,6 @@
 
 import gridfs
 import pymongo
-
 from pymatgen.core import Composition, Structure
 from pymatgen.electronic_structure.core import Orbital, Spin
 from pymatgen.electronic_structure.dos import CompleteDos, Dos