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trial.py
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559 lines (456 loc) · 18.3 KB
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from psychopy import core, visual, gui, data, event
import numpy as np
import logging
import json
from eyetracking import height2pix
from util import jsonify
wait = core.wait
COLOR_PLAN = '#F2384A'
COLOR_ACT = '#126DEF'
from graphics import Graphics, FRAME_RATE
def reward_string(r):
return f'{int(r):+}' if r else ''
def distance(p1, p2):
(x1, y1), (x2, y2) = (p1, p2)
return np.sqrt((x1 - x2)**2 + (y1 - y2)**2)
class GraphTrial(object):
"""Graph navigation interface"""
def __init__(self, win, graph, rewards, start, layout, plan_time=None, act_time=None, start_mode=None,
highlight_edges=False, stop_on_x=True, hide_rewards_while_acting=True, initial_stage='planning',
eyelink=None, gaze_contingent=False, gaze_tolerance=1.2, fixation_lag = .5, show_gaze=False,
pos=(0, 0), space_start=True, max_score=None, **kws):
self.win = win
self.graph = graph
self.rewards = list(rewards)
self.start = start
self.layout = layout
self.plan_time = plan_time
self.act_time = act_time
if start_mode is None:
start_mode = 'drift_check' if eyelink else 'space'
self.start_mode = start_mode
self.highlight_edges = highlight_edges
self.stop_on_x = stop_on_x
self.hide_rewards_while_acting = hide_rewards_while_acting
self.eyelink = eyelink
self.gaze_contingent = gaze_contingent
self.gaze_tolerance = gaze_tolerance
self.fixation_lag = fixation_lag
self.show_gaze = show_gaze
self.last_gaze = None
self.pos = pos
self.space_start = space_start
self.max_score = max_score
# all for current stage
self.stage = initial_stage
self.current_time = None
self.start_time = None
self.end_time = None
self.status = 'ok'
self.disable_click = False
self.score = 0
self.current_state = None
self.fixated = None
self.fix_verified = None
self.data = {
"trial": {
"kind": self.__class__.__name__,
"graph": graph,
"rewards": rewards,
"start": start,
"plan_time": plan_time,
"act_time": act_time,
"gaze_contingent": gaze_contingent,
"gaze_tolerance": gaze_tolerance,
"fixation_lag": fixation_lag
},
"events": [],
"flips": [],
"mouse": [],
}
logging.debug("begin trial " + jsonify(self.data["trial"]))
self.gfx = Graphics(win)
self.mouse = event.Mouse()
self.done = False
def log(self, event, info={}):
time = core.getTime()
logging.debug(f'{self.__class__.__name__}.log {time:3.3f} {event} ' + ', '.join(f'{k} = {v}' for k, v in info.items()))
datum = {
'time': time,
'event': event,
**info
}
self.data["events"].append(datum)
if self.eyelink:
self.eyelink.message(jsonify(datum), log=False)
def show(self):
# self.win.clearAutoDraw()
if hasattr(self, 'nodes'):
self.gfx.show()
if self.gaze_contingent:
self.update_fixation()
return
self.nodes = nodes = []
for i, (x, y) in enumerate(self.layout):
nodes.append(self.gfx.circle(0.7 * np.array([x, y]), name=f'node{i}', r=.04))
self.data["trial"]["node_positions"] = [height2pix(self.win, n.pos) for n in self.nodes]
self.reward_labels = [self.gfx.text('', n.pos, height=.04, name=f'lab{i}') for i, n in enumerate(self.nodes)]
self.update_node_labels()
self.arrows = {}
for i, js in enumerate(self.graph):
for j in js:
self.arrows[(i, j)] = self.gfx.arrow(nodes[i], nodes[j])
if self.plan_time is not None or self.act_time is not None:
self.timer_wrap = self.gfx.rect((0.5,-0.45), .02, 0.9, anchor='bottom', color=-.1)
self.timer = self.gfx.rect((0.5,-0.45), .02, 0.9, anchor='bottom', color=-.2)
else:
self.timer = None
self.mask = self.gfx.rect((.1,0), 1.1, 1, color='gray', opacity=0)
self.gfx.shift(*self.pos)
if self.show_gaze:
self.gaze_dot = self.gfx.circle((0,0), .005, color='red', lineWidth=1, lineColor="red")
def hide(self):
self.gfx.clear()
def shift(self, x, y):
self.gfx.shift(x, y)
self.pos = np.array(self.pos) + [x, y]
def set_reward(self, s, r):
self.rewards[s] = r
self.reward_labels[s].text = reward_string(r)
def get_click(self):
if self.mouse.getPressed()[0]:
pos = self.mouse.getPos()
for (i, n) in enumerate(self.nodes):
if n.contains(pos):
return i
def set_state(self, s):
self.log('visit', {'state': s})
self.nodes[s].fillColor = COLOR_PLAN if self.stage == 'planning' else COLOR_ACT
lab = self.reward_labels[s]
self.score += self.rewards[s]
prev = self.current_state
self.set_node_label(s, reward_string(self.rewards[s]))
self.current_state = s
if len(self.graph[self.current_state]) == 0:
self.done = True
if prev is not None and prev != s: # not initial
self.nodes[prev].fillColor = 'white'
lab.color = 'white'
# lab.bold = True
for p in self.gfx.animate(6/60):
lab.setHeight(0.04 + p * 0.02)
self.tick()
for p in self.gfx.animate(12/60):
lab.setHeight(0.06 - p * 0.05)
lab.setOpacity(1-p)
self.tick()
lab.setText('')
def click(self, s):
if s in self.graph[self.current_state]:
self.set_state(s)
def is_done(self):
return len(self.graph[self.current_state]) == 0
def fade_out(self):
for p in self.gfx.animate(.2):
self.mask.setOpacity(p)
self.win.flip()
self.gfx.clear()
self.win.flip()
wait(.3)
def node_label(self, i):
if self.gaze_contingent:
if i == self.fixated:
return reward_string(self.rewards[i])
elif self.rewards[i]:
return '?'
else:
return ''
else:
return reward_string(self.rewards[i])
def update_node_labels(self):
for i in range(len(self.nodes)):
self.set_node_label(i, self.node_label(i))
# logging.debug('update_node_labels %s', [lab.text for lab in self.reward_labels])
def set_node_label(self, i, new):
old = self.reward_labels[i].text
if old != new:
# logging.debug(f'Changing reward_label[%s] from %s to %s', i, old, new)
self.reward_labels[i].text = new
def update_fixation(self):
if not self.eyelink:
return
gaze = self.eyelink.gaze_position()
if self.last_gaze is not None:
gaze_distance = distance(gaze, self.last_gaze)
self.last_gaze = gaze
if self.show_gaze:
self.gaze_dot.setPos(gaze)
self.last_fixated = self.fixated
for i in range(len(self.nodes)):
if distance(gaze, self.nodes[i].pos) < self.gaze_tolerance * self.nodes[i].radius:
if self.fixated != i:
self.log('fixate state', {'state': i})
self.fixated = i
self.fix_verified = core.getTime()
break
if self.fixated is not None and core.getTime() - self.fix_verified > self.fixation_lag:
self.log('unfixate state', {'state': self.fixated})
self.fixated = None
if self.gaze_contingent and self.last_fixated != self.fixated:
self.update_node_labels()
def check_click(self):
if self.disable_click:
return
clicked = self.get_click()
if clicked is not None and clicked in self.graph[self.current_state]:
self.set_state(clicked)
return True
def highlight_current_edges(self):
for (i, j), arrow in self.arrows.items():
if i == self.current_state:
arrow.setColor('#FFC910')
arrow.objects[0].setDepth(1) # make sure the line is on top
self.nodes[j].setLineColor('#FFC910')
else:
arrow.setColor('black')
arrow.objects[0].setDepth(2)
self.nodes[j].setLineColor('black')
def tick(self):
self.current_time = core.getTime()
if self.end_time is not None: # TODO
time_left = self.end_time - self.current_time
if time_left > 0:
p = time_left / (self.end_time - self.start_time)
self.timer.setHeight(0.9 * p)
if self.stage == 'acting' and time_left < 3:
p2 = time_left / 3
original = -.2 * np.ones(3)
red = np.array([1, -1, -1])
self.timer.setColor(p2 * original + (1-p2) * red)
self.last_flip = t = self.win.flip()
self.data["mouse"].append(self.mouse.getPos())
self.data["flips"].append(t)
return t
def do_timeout(self):
self.log('timeout')
logging.info('timeout')
for i in range(3):
self.timer_wrap.setColor('red'); self.win.flip()
wait(0.3)
self.timer_wrap.setColor(-.2); self.win.flip()
wait(0.3)
# random choices
while not self.done:
self.set_state(np.random.choice(self.graph[self.current_state]))
core.wait(.5)
def start_recording(self):
self.log('start recording')
self.eyelink.start_recording()
# TODO: draw reference
# left = int(scn_width/2.0) - 60
# top = int(scn_height/2.0) - 60
# right = int(scn_width/2.0) + 60
# bottom = int(scn_height/2.0) + 60
# draw_cmd = 'draw_filled_box %d %d %d %d 1' % (left, top, right, bottom)
# el_tracker.sendCommand(draw_cmd)
def run_planning(self):
self.log('start planning')
self.stage = 'planning'
self.nodes[self.current_state].fillColor = COLOR_PLAN
self.start_time = self.current_time = core.getTime()
self.end_time = None if self.plan_time is None else self.start_time + self.plan_time
while not self.done:
if self.end_time is not None and self.current_time > self.end_time:
self.log('timeout planning')
self.done = True
break
self.update_fixation()
keys = event.getKeys()
clicked = self.get_click()
if clicked == self.current_state:
self.log('end planning')
break
elif 'x' in keys or 'c' in keys:
logging.warning('press x')
self.log('press x')
self.status = 'recalibrate'
if self.stop_on_x:
self.done = True
break
elif 'a' in keys:
logging.warning('press a')
self.log('press a')
self.status = 'abort'
self.tick()
self.fixated = None
self.win.flip()
def hide_rewards(self):
for i in range(len(self.nodes)):
self.set_node_label(i, '')
def run_acting(self, one_step):
self.nodes[self.current_state].fillColor = COLOR_ACT
self.log('start acting')
if self.hide_rewards_while_acting:
self.hide_rewards()
self.stage = 'acting'
self.start_time = self.current_time = core.getTime()
self.end_time = None if self.act_time is None else self.start_time + self.act_time
while not self.done:
moved = self.check_click()
if moved and one_step:
return
if self.highlight_edges:
self.highlight_current_edges()
if not self.done and self.end_time is not None and self.current_time > self.end_time:
self.do_timeout()
self.tick()
def run(self, one_step=False, skip_planning=False):
if self.start_mode == 'drift_check':
self.log('begin drift_check')
self.status = self.eyelink.drift_check(self.pos)
elif self.start_mode == 'fixation':
self.log('begin fixation')
self.status = self.eyelink.fake_drift_check(self.pos)
elif self.start_mode == 'space':
self.log('begin space')
visual.TextStim(self.win, 'press space to start', pos=self.pos, color='white', height=.035).draw()
self.win.flip()
event.waitKeys(keyList=['space'])
self.log('initialize status', {'status': self.status})
if self.status in ('abort', 'recalibrate'):
self.log('done', {"status": self.status})
return self.status
if self.eyelink:
self.start_recording()
self.show()
if self.current_state is None:
self.set_state(self.start)
self.start_time = self.tick()
self.log('start', {'flip_time': self.start_time})
if not (one_step or skip_planning):
self.run_planning()
if not self.done:
self.run_acting(one_step)
if one_step:
return
self.log('done')
logging.debug("end trial " + jsonify(self.data["events"]))
if self.eyelink:
self.eyelink.stop_recording()
wait(.3)
self.fade_out()
return self.status
class CalibrationTrial(GraphTrial):
"""docstring for CalibrationTrial"""
all_failures = np.zeros(11) # across separate runs ASSUME graph doesn't change
def __init__(self, *args, saccade_time=.7, n_success=2, n_fail=3, target_delay=.3 , **kwargs):
kwargs['gaze_contingent'] = True
kwargs['fixation_lag'] = .1
kwargs['end_time'] = None
self.saccade_time = saccade_time
self.n_success = n_success
self.n_fail = n_fail
self.target_delay = target_delay
self.target = None
self.last_target = None
self.arrow = None
self.result = None
super().__init__(*args, **kwargs)
def node_label(self, i):
return {
# self.completed: ''
# self.fixated: '',
self.target: 'O',
}.get(i, '')
def do_timeout(self):
self.log('timeout')
logging.info('timeout')
self.result = 'timeout'
def draw_arrow(self):
if self.arrow is not None:
self.arrow.setAutoDraw(False)
if self.last_target is not None:
self.arrow = self.gfx.arrow(self.nodes[self.last_target], self.nodes[self.target])
def new_target(self):
initial = self.target is None
self.last_target = self.target
if initial:
self.target = np.random.choice(len(self.successes))
else:
p = np.exp(
-5 * self.successes +
self.all_failures[:len(self.successes)]
)
p[self.target] = 0
p /= (sum(p) or 1) # prevent divide by 0
self.target = np.random.choice(len(p), p=p)
self.target_time = 'flip' # updated to be next flip time
self.draw_arrow()
self.update_node_labels()
self.log('new target', {"state": self.target})
def tick(self):
t = super().tick()
if self.target_time == 'flip':
self.target_time = t
def run(self, timeout=15):
assert self.eyelink
# self.eyelink.drift_check(self.pos)
self.start_recording()
self.show()
self.successes = np.zeros(len(self.nodes))
self.failures = np.zeros(len(self.nodes))
self.uncomplete = set(range(len(self.nodes)))
self.new_target()
self.start_time = self.tick()
self.log('start', {'flip_time': self.start_time})
self.win.mouseVisible = False
self.target_time += 5 # extra time for first fixation
while self.result is None:
self.update_fixation()
if 'x' in event.getKeys(): # cancel key
self.log('cancel')
self.result = 'cancelled'
elif self.last_flip > self.target_time + self.saccade_time: # timeout
self.log('timeout', {"state": self.target})
self.failures[self.target] += 1
self.all_failures[self.target] += 1
self.set_node_label(self.target, 'X')
lab = self.reward_labels[self.target]
for p in range(FRAME_RATE):
lab.setOpacity(1 - (p // 10) % 2)
self.tick()
wait(self.target_delay)
lab.setOpacity(1)
if sum(self.failures) == self.n_fail or self.failures[self.target] == 2:
self.result = 'failure'
else:
self.new_target()
elif self.fixated == self.target: # fixated within time
self.log('fixated target', {"state": self.target})
self.successes[self.target] += 1
lab = self.reward_labels[self.target]
for p in self.gfx.animate(6/60):
lab.setHeight(0.04 + p * 0.02)
self.tick()
for p in self.gfx.animate(12/60):
lab.setHeight(0.06 - p * 0.03)
lab.setOpacity(1-p)
self.tick()
wait(self.target_delay)
lab.setOpacity(1)
lab.setHeight(.03)
if self.successes[self.target] == self.n_success:
self.uncomplete.remove(self.target)
if self.uncomplete:
self.new_target()
else:
self.result = 'success'
# if not self.done and self.end_time is not None and self.start_time + self.end_time < core.getTime():
# self.do_timeout()
t = self.tick()
self.log('done')
self.eyelink.stop_recording()
wait(.3)
self.fade_out()
self.win.mouseVisible = True
return self.result