Switch Pod User and Use HAMantis

Ezequiel-Valencia · Ezequiel-Valencia · commit c57a799e1927 · 2025-09-15T14:51:38.000-04:00
diff --git a/compose_api/simulation/simulation_service.py b/compose_api/simulation/simulation_service.py
@@ -113,7 +113,6 @@ async def submit_simulation_job(
                     pushd {experiment_path}/output/
                     zip -r {experiment_path}/results.zip ./*
                     popd
-                    chmod u=rwx,g=rx,o=rx {experiment_path}
                     echo "Simulation run completed. data saved to {experiment_path!s}."
                     """)
                 f.write(script_content)
diff --git a/kustomize/base/api.yaml b/kustomize/base/api.yaml
@@ -16,10 +16,10 @@ spec:
     spec:
       nodeSelector:
         vlan: internal
-      #      securityContext:
-      #        runAsUser: 17163
-      #        runAsGroup: 10000
-      #        fsGroup: 10000
+      securityContext:
+        runAsUser: 16997
+        runAsGroup: 10000
+        fsGroup: 10000
       containers:
         - name: api
           image: ghcr.io/biosimulations/compose-api:latest
diff --git a/kustomize/config/compose-api-rke/shared.env b/kustomize/config/compose-api-rke/shared.env
@@ -1,5 +1,5 @@
 #SLURM_SUBMIT_HOST=hamantis.cam.uchc.edu
-SLURM_SUBMIT_HOST=mantis-sub-7.cam.uchc.edu
+SLURM_SUBMIT_HOST=hamantis.cam.uchc.edu
 SLURM_SUBMIT_USER=crbmapi
 #SLURM_SUBMIT_KEY_PATH=/run/secrets/slurmsubmitkeyfile/ssh-privatekey
 SLURM_PARTITION=general
