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Release new METPO ontology version
Update all release artifacts (base, full, and main editions in OWL, OBO, and JSON formats) along with updated templates and component files. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude <[email protected]>
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‎metpo-base.json‎

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@@ -25,9 +25,9 @@
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"val" : "METPO"
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}, {
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"pred" : "http://www.w3.org/2002/07/owl#versionInfo",
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"val" : "2025-10-15"
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"val" : "2025-10-31"
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} ],
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"version" : "https://w3id.org/metpo/metpo/releases/2025-10-15/metpo-base.json"
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"version" : "https://w3id.org/metpo/metpo/releases/2025-10-31/metpo-base.json"
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},
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"nodes" : [ {
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"id" : "http://purl.org/dc/elements/1.1/type",

‎metpo-base.obo‎

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format-version: 1.2
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data-version: https://w3id.org/metpo/metpo/releases/2025-10-15/metpo-base.owl
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data-version: https://w3id.org/metpo/metpo/releases/2025-10-31/metpo-base.owl
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idspace: dce http://purl.org/dc/elements/1.1/
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idspace: dcterms http://purl.org/dc/terms/
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ontology: https://w3id.org/metpo/metpo/metpo-base.owl
@@ -10,5 +10,5 @@ property_value: dcterms:issued "2024-01-01" xsd:string
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property_value: dcterms:license https://creativecommons.org/licenses/by/4.0/
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property_value: dcterms:modified "2025-09-29" xsd:string
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property_value: dcterms:title "METPO" xsd:string
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property_value: owl:versionInfo "2025-10-15" xsd:string
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property_value: owl:versionInfo "2025-10-31" xsd:string
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‎metpo-base.owl‎

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xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
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xmlns:dcterms="http://purl.org/dc/terms/">
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<owl:Ontology rdf:about="https://w3id.org/metpo/metpo/metpo-base.owl">
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<owl:versionIRI rdf:resource="https://w3id.org/metpo/metpo/releases/2025-10-15/metpo-base.owl"/>
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<owl:versionIRI rdf:resource="https://w3id.org/metpo/metpo/releases/2025-10-31/metpo-base.owl"/>
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<dce:type rdf:resource="http://purl.obolibrary.org/obo/IAO_8000001"/>
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<dcterms:creator>METPO Development Team</dcterms:creator>
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<dcterms:description>Microbial ecophysiological trait and phenotype ontology</dcterms:description>
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<dcterms:issued>2024-01-01</dcterms:issued>
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<dcterms:license rdf:resource="https://creativecommons.org/licenses/by/4.0/"/>
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<dcterms:modified>2025-09-29</dcterms:modified>
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<dcterms:title>METPO</dcterms:title>
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<owl:versionInfo>2025-10-15</owl:versionInfo>
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<owl:versionInfo>2025-10-31</owl:versionInfo>
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</owl:Ontology>
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‎metpo-full.json‎

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"val" : "METPO"
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}, {
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"pred" : "http://www.w3.org/2002/07/owl#versionInfo",
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"val" : "2025-10-15"
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"val" : "2025-10-31"
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} ],
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"version" : "https://w3id.org/metpo/metpo/releases/2025-10-15/metpo-full.json"
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"version" : "https://w3id.org/metpo/metpo/releases/2025-10-31/metpo-full.json"
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},
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"nodes" : [ {
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"id" : "https://w3id.org/metpo/1000059",
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}, {
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"id" : "https://w3id.org/metpo/1001101",
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"lbl" : "biosafety level",
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"type" : "CLASS"
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "Safety information.risk assessment.biosafety level"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1001102",
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"lbl" : "biosafety level 1",
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"type" : "CLASS"
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "1"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1001103",
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"lbl" : "biosafety level 2",
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"type" : "CLASS"
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "2"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1001104",
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"lbl" : "biosafety level 3",
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"type" : "CLASS"
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "3"
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}, {
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"pred" : "hasRelatedSynonym",
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"val" : "3**"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1001105",
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"lbl" : "biosafety level 4",
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"type" : "CLASS"
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "4"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1001106",
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"lbl" : "biosafety level 5",
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"type" : "CLASS",
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"meta" : {
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "5"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1002003",
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"lbl" : "Cable bacteria metabolism",
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"val" : "Pigment_carotenoid"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1004000",
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"lbl" : "pathogenic to host",
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"type" : "CLASS",
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"meta" : {
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"definition" : {
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"val" : "A pathogenicity phenotype where a microbe is a pathogen of of some host organism."
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}
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}
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}, {
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"id" : "https://w3id.org/metpo/1004002",
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"lbl" : "animal pathogen",
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"type" : "CLASS",
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"meta" : {
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"definition" : {
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"val" : "A pathogenicity phenotype where a microbe is a pathogen of animals (Metazoa)."
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},
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "animal pathogen"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1004003",
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"lbl" : "plant pathogen",
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"type" : "CLASS",
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"meta" : {
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"definition" : {
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"val" : "A pathogenicity phenotype where a microbe is a pathogen of plants (Viridiplantae)."
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},
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "plant pathogen"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/1004004",
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"lbl" : "human pathogen",
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"type" : "CLASS",
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"meta" : {
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"definition" : {
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"val" : "A pathogenicity phenotype where a microbe is a pathogen of humans (Homo sapiens)."
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},
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"synonyms" : [ {
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"pred" : "hasRelatedSynonym",
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"val" : "human pathogen"
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} ]
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}
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}, {
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"id" : "https://w3id.org/metpo/2000001",
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"lbl" : "organism interacts with chemical",
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"sub" : "https://w3id.org/metpo/1001105",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1001101"
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}, {
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"sub" : "https://w3id.org/metpo/1001106",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1001101"
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}, {
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"sub" : "https://w3id.org/metpo/1002003",
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"pred" : "is_a",
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"sub" : "https://w3id.org/metpo/1003031",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1003021"
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}, {
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"sub" : "https://w3id.org/metpo/1004000",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1000059"
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}, {
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"sub" : "https://w3id.org/metpo/1004002",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1004000"
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}, {
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"sub" : "https://w3id.org/metpo/1004003",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1004000"
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}, {
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"sub" : "https://w3id.org/metpo/1004004",
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"pred" : "is_a",
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"obj" : "https://w3id.org/metpo/1004000"
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}, {
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"sub" : "https://w3id.org/metpo/2000002",
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"pred" : "subPropertyOf",

‎metpo-full.obo‎

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format-version: 1.2
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data-version: https://w3id.org/metpo/metpo/releases/2025-10-15/metpo-full.owl
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data-version: https://w3id.org/metpo/metpo/releases/2025-10-31/metpo-full.owl
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idspace: dce http://purl.org/dc/elements/1.1/
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idspace: dcterms http://purl.org/dc/terms/
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idspace: metpo https://w3id.org/metpo/
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property_value: dcterms:license https://creativecommons.org/licenses/by/4.0/
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property_value: dcterms:modified "2025-09-29" xsd:string
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property_value: dcterms:title "METPO" xsd:string
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property_value: owl:versionInfo "2025-10-15" xsd:string
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property_value: owl:versionInfo "2025-10-31" xsd:string
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[Term]
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id: metpo:1000059
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[Term]
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id: metpo:1001101
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name: biosafety level
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synonym: "Safety information.risk assessment.biosafety level" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1000188 ! quality
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[Term]
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id: metpo:1001102
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name: biosafety level 1
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synonym: "1" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1001101 ! biosafety level
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[Term]
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id: metpo:1001103
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name: biosafety level 2
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synonym: "2" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1001101 ! biosafety level
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[Term]
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id: metpo:1001104
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name: biosafety level 3
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synonym: "3" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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synonym: "3**" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1001101 ! biosafety level
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[Term]
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id: metpo:1001105
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name: biosafety level 4
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synonym: "4" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1001101 ! biosafety level
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[Term]
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id: metpo:1001106
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name: biosafety level 5
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synonym: "5" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1001101 ! biosafety level
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[Term]
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synonym: "Pigment_carotenoid" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"}
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is_a: metpo:1003021 ! pigmentation
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[Term]
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id: metpo:1004000
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name: pathogenic to host
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def: "A pathogenicity phenotype where a microbe is a pathogen of of some host organism." []
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is_a: metpo:1000059 ! phenotype
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[Term]
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id: metpo:1004002
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name: animal pathogen
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def: "A pathogenicity phenotype where a microbe is a pathogen of animals (Metazoa)." []
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synonym: "animal pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1004000 ! pathogenic to host
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[Term]
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id: metpo:1004003
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name: plant pathogen
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def: "A pathogenicity phenotype where a microbe is a pathogen of plants (Viridiplantae)." []
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synonym: "plant pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1004000 ! pathogenic to host
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[Term]
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id: metpo:1004004
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name: human pathogen
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def: "A pathogenicity phenotype where a microbe is a pathogen of humans (Homo sapiens)." []
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synonym: "human pathogen" RELATED [] {IAO:0000119="https://bacdive.dsmz.de/"}
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is_a: metpo:1004000 ! pathogenic to host
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[Typedef]
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id: metpo:2000001
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name: organism interacts with chemical

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