11# VFBquery Performance Test Results
22
3- ** Test Date:** 2026-01-27 18:34:25 UTC
4- ** Git Commit:** 79bb56c458f0839f33adf6e7a637e2bb927ffc80
3+ ** Test Date:** 2026-01-27 21:09:57 UTC
4+ ** Git Commit:** bc6a9d7a030d870d1a12ebd68d6218f560fd8163
55** Branch:** main
6- ** Workflow Run:** [ 21409343171 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21409343171 )
6+ ** Workflow Run:** [ 21414252988 ] ( https://github.com/VirtualFlyBrain/VFBquery/actions/runs/21414252988 )
77
88## Test Overview
99
@@ -116,7 +116,7 @@ test_14_publication_transgene_queries (src.test.test_query_performance.QueryPerf
116116Test publication and transgene queries ... ok
117117
118118----------------------------------------------------------------------
119- Ran 15 tests in 56.387s
119+ Ran 15 tests in 49.815s
120120
121121OK
122122VFBquery functions patched with caching support
@@ -128,118 +128,118 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
128128================================================================================
129129TERM INFO QUERIES
130130================================================================================
131- get_term_info (mushroom body): 2.3866s ✅
132- get_term_info (individual): 2.4151s ✅
131+ get_term_info (mushroom body): 1.8017s ✅
132+ get_term_info (individual): 2.1590s ✅
133133
134134================================================================================
135135NEURON PART OVERLAP QUERIES
136136================================================================================
137- NeuronsPartHere: 2.3345s ✅
137+ NeuronsPartHere: 1.8172s ✅
138138
139139================================================================================
140140SYNAPTIC TERMINAL QUERIES
141141================================================================================
142- NeuronsSynaptic: 2.1678s ✅
143- NeuronsPresynapticHere: 1.8441s ✅
144- NeuronsPostsynapticHere: 2.0998s ✅
145- NeuronNeuronConnectivity: 1.9843s ✅
142+ NeuronsSynaptic: 2.1902s ✅
143+ NeuronsPresynapticHere: 1.4688s ✅
144+ NeuronsPostsynapticHere: 2.1161s ✅
145+ NeuronNeuronConnectivity: 1.3306s ✅
146146
147147================================================================================
148148ANATOMICAL HIERARCHY QUERIES
149149================================================================================
150- ComponentsOf: 1.8003s ✅
151- PartsOf: 1.8523s ✅
152- SubclassesOf: 1.8281s ✅
150+ ComponentsOf: 1.5110s ✅
151+ PartsOf: 1.3041s ✅
152+ SubclassesOf: 1.3112s ✅
153153
154154================================================================================
155155TRACT/NERVE AND LINEAGE QUERIES
156156================================================================================
157- NeuronClassesFasciculatingHere: 1.8296s ✅
158- TractsNervesInnervatingHere: 1.7945s ✅
159- LineageClonesIn: 1.8121s ✅
157+ NeuronClassesFasciculatingHere: 1.4739s ✅
158+ TractsNervesInnervatingHere: 1.3211s ✅
159+ LineageClonesIn: 1.2173s ✅
160160
161161================================================================================
162162IMAGE AND DEVELOPMENTAL QUERIES
163163================================================================================
164- ImagesNeurons: 1.8419s ✅
165- ImagesThatDevelopFrom: 1.7726s ✅
166- epFrag: 1.7836s ✅
164+ ImagesNeurons: 1.2267s ✅
165+ ImagesThatDevelopFrom: 1.2391s ✅
166+ epFrag: 1.2248s ✅
167167
168168================================================================================
169169INSTANCE QUERIES
170170================================================================================
171- ListAllAvailableImages: 1.8095s ✅
171+ ListAllAvailableImages: 1.4873s ✅
172172
173173================================================================================
174174CONNECTIVITY QUERIES
175175================================================================================
176- NeuronNeuronConnectivityQuery: 1.7820s ✅
177- NeuronRegionConnectivityQuery: 1.8292s ✅
176+ NeuronNeuronConnectivityQuery: 1.2280s ✅
177+ NeuronRegionConnectivityQuery: 1.2380s ✅
178178
179179================================================================================
180180SIMILARITY QUERIES (Neo4j NBLAST)
181181================================================================================
182- SimilarMorphologyTo: 1.0780s ✅
182+ SimilarMorphologyTo: 0.7255s ✅
183183
184184================================================================================
185185NEURON INPUT QUERIES (Neo4j)
186186================================================================================
187- NeuronInputsTo: 3.4846s ✅
187+ NeuronInputsTo: 5.9788s ✅
188188
189189================================================================================
190190EXPRESSION PATTERN QUERIES (Neo4j)
191191================================================================================
192- ExpressionOverlapsHere: 2.2544s ✅
192+ ExpressionOverlapsHere: 0.7253s ✅
193193 └─ Found 3922 total expression patterns, returned 10
194194
195195================================================================================
196196TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
197197================================================================================
198- anatScRNAseqQuery: 0.8748s ✅
198+ anatScRNAseqQuery: 0.7157s ✅
199199 └─ Found 0 total clusters
200- clusterExpression: 0.8330s ✅
200+ clusterExpression: 0.6933s ✅
201201 └─ Found 0 genes expressed
202- expressionCluster: 0.7233s ✅
202+ expressionCluster: 0.5116s ✅
203203 └─ Found 0 clusters expressing gene
204- scRNAdatasetData: 0.7389s ✅
204+ scRNAdatasetData: 0.5942s ✅
205205 └─ Found 0 clusters in dataset
206206
207207================================================================================
208208NBLAST SIMILARITY QUERIES
209209================================================================================
210- SimilarMorphologyTo: 1.1559s ✅
210+ SimilarMorphologyTo: 2.6655s ✅
211211 └─ Found 215 NBLAST matches, returned 10
212- SimilarMorphologyToPartOf: 0.7081s ✅
212+ SimilarMorphologyToPartOf: 0.5785s ✅
213213 └─ Found 0 NBLASTexp matches
214- SimilarMorphologyToPartOfexp: 0.7085s ✅
214+ SimilarMorphologyToPartOfexp: 0.5778s ✅
215215 └─ Found 0 reverse NBLASTexp matches
216- SimilarMorphologyToNB: 0.6809s ✅
216+ SimilarMorphologyToNB: 1.5145s ✅
217217 └─ Found 15 NeuronBridge matches, returned 10
218- SimilarMorphologyToNBexp: 0.6950s ✅
218+ SimilarMorphologyToNBexp: 0.5027s ✅
219219 └─ Found 15 NeuronBridge expression matches, returned 10
220220✅ All NBLAST similarity queries completed
221221
222222================================================================================
223223DATASET/TEMPLATE QUERIES
224224================================================================================
225- PaintedDomains: 0.7159s ✅
225+ PaintedDomains: 0.6406s ✅
226226 └─ Found 0 painted domains
227- DatasetImages: 0.8228s ✅
227+ DatasetImages: 0.5297s ✅
228228 └─ Found 0 images in dataset
229- AllAlignedImages: 0.6860s ✅
229+ AllAlignedImages: 0.6682s ✅
230230 └─ Found 0 aligned images
231- AlignedDatasets: 0.8699s ✅
231+ AlignedDatasets: 0.6947s ✅
232232 └─ Found 0 aligned datasets
233- AllDatasets: 0.9777s ✅
233+ AllDatasets: 1.6913s ✅
234234 └─ Found 116 total datasets, returned 20
235235✅ All dataset/template queries completed
236236
237237================================================================================
238238PUBLICATION/TRANSGENE QUERIES
239239================================================================================
240- TermsForPub: 0.6524s ✅
240+ TermsForPub: 0.5484s ✅
241241 └─ Found 0 terms for publication
242- TransgeneExpressionHere: 0.7556s ✅
242+ TransgeneExpressionHere: 0.5889s ✅
243243 └─ Found 2346 transgene expressions, returned 10
244244✅ All publication/transgene queries completed
245245
@@ -252,7 +252,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
252252Performance test for specific term info queries. ... ok
253253
254254----------------------------------------------------------------------
255- Ran 1 test in 3.704s
255+ Ran 1 test in 5.876s
256256
257257OK
258258VFBquery functions patched with caching support
@@ -262,9 +262,9 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
262262==================================================
263263Performance Test Results:
264264==================================================
265- FBbt_00003748 query took: 1.7962 seconds
266- VFB_00101567 query took: 1.9079 seconds
267- Total time for both queries: 3.7041 seconds
265+ FBbt_00003748 query took: 4.6370 seconds
266+ VFB_00101567 query took: 1.2390 seconds
267+ Total time for both queries: 5.8760 seconds
268268Performance Level: 🟠 Acceptable (3-6 seconds)
269269==================================================
270270Performance test completed successfully!
@@ -283,4 +283,4 @@ Track performance trends across commits:
283283- [ GitHub Actions History] ( https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml )
284284
285285---
286- * Last updated: 2026-01-27 18:34:25 UTC*
286+ * Last updated: 2026-01-27 21:09:57 UTC*
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