-
Notifications
You must be signed in to change notification settings - Fork 4
Open
Labels
enhancementNew feature or requestNew feature or request
Description
Summary
Tedana outputs several PCA-related files (e.g., desc-PCA_metrics.tsv, desc-PCA_mixing.tsv, desc-PCA_stat-z_components.nii. gz) that contain important dimensionality reduction information prior to ICA decomposition. Rica currently lacks a dedicated PCA visualization.
Additional Detail
Add a "PCA" tab to Rica that displays:
- PCA scatter plots for metrics and explained variance
- Interactive visualization of PCA stat-z maps (using Niivue/mosaic, like ICA)
- Table of metrics and mixing coefficients with sort/filter options
- Option to compare PCA and ICA components side-by-side
- Documentation linking to tedana's PCA outputs
Next Steps
- Design wireframe/UI for PCA tab
- Identify standard PCA metrics in tedana outputs
- Integrate Niivue-brain viewer for PCA maps
- Implement table and scatter plot widgets
- Update docs and onboarding for new tab
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
enhancementNew feature or requestNew feature or request