Skip to content

Commit 17956e8

Browse files
authored
Merge pull request EESSI#678 from EESSIbot/update-software-overview-1770817181
update overview of available software
2 parents d90db23 + b529b00 commit 17956e8

File tree

10 files changed

+353
-5
lines changed

10 files changed

+353
-5
lines changed

docs/available_software/data/json_data.json

Lines changed: 1 addition & 1 deletion
Large diffs are not rendered by default.

docs/available_software/data/json_data_detail.json

Lines changed: 1 addition & 1 deletion
Large diffs are not rendered by default.
Lines changed: 56 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,56 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: AmberTools consists of several independently developed packages that
9+
work well by themselves, and with Amber itself. The suite can also be used to
10+
carry out complete molecular dynamics simulations, with either explicit water
11+
or generalized Born solvent models.
12+
license: Not confirmed
13+
name: AmberTools
14+
offers:
15+
'@type': Offer
16+
price: 0
17+
operatingSystem: LINUX
18+
review:
19+
'@type': Review
20+
author:
21+
'@type': Organization
22+
name: EESSI
23+
reviewBody: Application has been successfully made available on all architectures
24+
supported by EESSI
25+
reviewRating:
26+
'@type': Rating
27+
ratingValue: 5
28+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
29+
on your system
30+
softwareVersion: '[''AmberTools/23.6-foss-2023a'']'
31+
url: https://ambermd.org/
32+
---
33+
34+
AmberTools
35+
==========
36+
37+
38+
AmberTools consists of several independently developed packages that work well by themselves, and with Amber itself. The suite can also be used to carry out complete molecular dynamics simulations, with either explicit water or generalized Born solvent models.
39+
40+
https://ambermd.org/
41+
# Available modules
42+
43+
44+
The overview below shows which AmberTools installations are available per target architecture in EESSI, ordered based on software version (new to old).
45+
46+
To start using AmberTools, load one of these modules using a `module load` command like:
47+
48+
```shell
49+
module load AmberTools/23.6-foss-2023a
50+
```
51+
52+
*(This data was automatically generated on {{ generated_time }})*
53+
54+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
55+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
56+
|AmberTools/23.6-foss-2023a|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
Lines changed: 53 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,53 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: Schrodinger-developed 2D Coordinate Generation
9+
license: Not confirmed
10+
name: CoordgenLibs
11+
offers:
12+
'@type': Offer
13+
price: 0
14+
operatingSystem: LINUX
15+
review:
16+
'@type': Review
17+
author:
18+
'@type': Organization
19+
name: EESSI
20+
reviewBody: Application has been successfully made available on all architectures
21+
supported by EESSI
22+
reviewRating:
23+
'@type': Rating
24+
ratingValue: 5
25+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
26+
on your system
27+
softwareVersion: '[''CoordgenLibs/3.0.2-gompi-2023a'']'
28+
url: https://github.com/schrodinger/coordgenlibs
29+
---
30+
31+
CoordgenLibs
32+
============
33+
34+
35+
Schrodinger-developed 2D Coordinate Generation
36+
37+
https://github.com/schrodinger/coordgenlibs
38+
# Available modules
39+
40+
41+
The overview below shows which CoordgenLibs installations are available per target architecture in EESSI, ordered based on software version (new to old).
42+
43+
To start using CoordgenLibs, load one of these modules using a `module load` command like:
44+
45+
```shell
46+
module load CoordgenLibs/3.0.2-gompi-2023a
47+
```
48+
49+
*(This data was automatically generated on {{ generated_time }})*
50+
51+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
52+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
53+
|CoordgenLibs/3.0.2-gompi-2023a|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
Lines changed: 56 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,56 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: Open Babel is a chemical toolbox designed to speak the many languages
9+
of chemical data. It's an open, collaborative project allowing anyone to search,
10+
convert, analyze, or store data from molecular modeling, chemistry, solid-state
11+
materials, biochemistry, or related areas.
12+
license: Not confirmed
13+
name: OpenBabel
14+
offers:
15+
'@type': Offer
16+
price: 0
17+
operatingSystem: LINUX
18+
review:
19+
'@type': Review
20+
author:
21+
'@type': Organization
22+
name: EESSI
23+
reviewBody: Application has been successfully made available on all architectures
24+
supported by EESSI
25+
reviewRating:
26+
'@type': Rating
27+
ratingValue: 5
28+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
29+
on your system
30+
softwareVersion: '[''OpenBabel/3.1.1-gompi-2023a'']'
31+
url: https://openbabel.org
32+
---
33+
34+
OpenBabel
35+
=========
36+
37+
38+
Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas.
39+
40+
https://openbabel.org
41+
# Available modules
42+
43+
44+
The overview below shows which OpenBabel installations are available per target architecture in EESSI, ordered based on software version (new to old).
45+
46+
To start using OpenBabel, load one of these modules using a `module load` command like:
47+
48+
```shell
49+
module load OpenBabel/3.1.1-gompi-2023a
50+
```
51+
52+
*(This data was automatically generated on {{ generated_time }})*
53+
54+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
55+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
56+
|OpenBabel/3.1.1-gompi-2023a|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
Lines changed: 62 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,62 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: A tool based in Python to use Antechamber to generate topologies for
9+
chemical compounds andto interface with others python applications like CCPN and
10+
ARIA.
11+
license: Not confirmed
12+
name: acpype
13+
offers:
14+
'@type': Offer
15+
price: 0
16+
operatingSystem: LINUX
17+
review:
18+
'@type': Review
19+
author:
20+
'@type': Organization
21+
name: EESSI
22+
reviewBody: Application has been successfully made available on all architectures
23+
supported by EESSI
24+
reviewRating:
25+
'@type': Rating
26+
ratingValue: 5
27+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
28+
on your system
29+
softwareVersion: '[''acpype/2023.10.27-foss-2023a'']'
30+
url: https://github.com/alanwilter/acpype
31+
---
32+
33+
acpype
34+
======
35+
36+
37+
A tool based in Python to use Antechamber to generate topologies for chemical compounds andto interface with others python applications like CCPN and ARIA.
38+
39+
https://github.com/alanwilter/acpype
40+
# Available modules
41+
42+
43+
The overview below shows which acpype installations are available per target architecture in EESSI, ordered based on software version (new to old).
44+
45+
To start using acpype, load one of these modules using a `module load` command like:
46+
47+
```shell
48+
module load acpype/2023.10.27-foss-2023a
49+
```
50+
51+
*(This data was automatically generated on {{ generated_time }})*
52+
53+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
54+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
55+
|acpype/2023.10.27-foss-2023a|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
56+
57+
58+
### acpype/2023.10.27-foss-2023a
59+
60+
This is a list of extensions included in the module:
61+
62+
acpype-2023.10.27
Lines changed: 60 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,60 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: A simple, correct Python build frontend.
9+
license: Not confirmed
10+
name: build
11+
offers:
12+
'@type': Offer
13+
price: 0
14+
operatingSystem: LINUX
15+
review:
16+
'@type': Review
17+
author:
18+
'@type': Organization
19+
name: EESSI
20+
reviewBody: Application has been successfully made available on all architectures
21+
supported by EESSI
22+
reviewRating:
23+
'@type': Rating
24+
ratingValue: 5
25+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
26+
on your system
27+
softwareVersion: '[''build/1.0.3-GCCcore-12.3.0'']'
28+
url: https://github.com/pypa/build
29+
---
30+
31+
build
32+
=====
33+
34+
35+
A simple, correct Python build frontend.
36+
37+
https://github.com/pypa/build
38+
# Available modules
39+
40+
41+
The overview below shows which build installations are available per target architecture in EESSI, ordered based on software version (new to old).
42+
43+
To start using build, load one of these modules using a `module load` command like:
44+
45+
```shell
46+
module load build/1.0.3-GCCcore-12.3.0
47+
```
48+
49+
*(This data was automatically generated on {{ generated_time }})*
50+
51+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
52+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
53+
|build/1.0.3-GCCcore-12.3.0|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
54+
55+
56+
### build/1.0.3-GCCcore-12.3.0
57+
58+
This is a list of extensions included in the module:
59+
60+
build-1.0.3, pyproject_hooks-1.0.0
Lines changed: 53 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,53 @@
1+
---
2+
hide:
3+
- toc
4+
json_ld:
5+
'@context': https://schema.org
6+
'@type': SoftwareApplication
7+
applicationCategory: DeveloperApplication
8+
description: maeparser is a parser for Schrodinger Maestro files.
9+
license: Not confirmed
10+
name: maeparser
11+
offers:
12+
'@type': Offer
13+
price: 0
14+
operatingSystem: LINUX
15+
review:
16+
'@type': Review
17+
author:
18+
'@type': Organization
19+
name: EESSI
20+
reviewBody: Application has been successfully made available on all architectures
21+
supported by EESSI
22+
reviewRating:
23+
'@type': Rating
24+
ratingValue: 5
25+
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
26+
on your system
27+
softwareVersion: '[''maeparser/1.3.1-gompi-2023a'']'
28+
url: https://github.com/schrodinger/maeparser
29+
---
30+
31+
maeparser
32+
=========
33+
34+
35+
maeparser is a parser for Schrodinger Maestro files.
36+
37+
https://github.com/schrodinger/maeparser
38+
# Available modules
39+
40+
41+
The overview below shows which maeparser installations are available per target architecture in EESSI, ordered based on software version (new to old).
42+
43+
To start using maeparser, load one of these modules using a `module load` command like:
44+
45+
```shell
46+
module load maeparser/1.3.1-gompi-2023a
47+
```
48+
49+
*(This data was automatically generated on {{ generated_time }})*
50+
51+
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
52+
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
53+
|maeparser/1.3.1-gompi-2023a|x|x|x|x|x|x|x|x|x|x|x|x|x|x|

docs/available_software/detail/poetry.md

Lines changed: 10 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -26,7 +26,8 @@ json_ld:
2626
ratingValue: 5
2727
softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
2828
on your system
29-
softwareVersion: '[''poetry/1.5.1-GCCcore-12.3.0'', ''poetry/1.6.1-GCCcore-13.2.0'']'
29+
softwareVersion: '[''poetry/1.5.1-GCCcore-12.3.0'', ''poetry/1.6.1-GCCcore-13.2.0'',
30+
''poetry/1.7.1-GCCcore-12.3.0'']'
3031
url: https://python-poetry.org
3132
---
3233

@@ -45,17 +46,24 @@ The overview below shows which poetry installations are available per target arc
4546
To start using poetry, load one of these modules using a `module load` command like:
4647

4748
```shell
48-
module load poetry/1.6.1-GCCcore-13.2.0
49+
module load poetry/1.7.1-GCCcore-12.3.0
4950
```
5051

5152
*(This data was automatically generated on {{ generated_time }})*
5253

5354
| |aarch64/generic|aarch64/a64fx|aarch64/neoverse_n1|aarch64/neoverse_v1|aarch64/nvidia/grace|x86_64/generic|x86_64/amd/zen2|x86_64/amd/zen3|x86_64/amd/zen4|x86_64/intel/cascadelake|x86_64/intel/haswell|x86_64/intel/icelake|x86_64/intel/sapphirerapids|x86_64/intel/skylake_avx512|
5455
| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
56+
|poetry/1.7.1-GCCcore-12.3.0|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
5557
|poetry/1.6.1-GCCcore-13.2.0|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
5658
|poetry/1.5.1-GCCcore-12.3.0|x|x|x|x|x|x|x|x|x|x|x|x|x|x|
5759

5860

61+
### poetry/1.7.1-GCCcore-12.3.0
62+
63+
This is a list of extensions included in the module:
64+
65+
attrs-23.2.0, CacheControl-0.13.1, certifi-2023.11.17, charset-normalizer-3.3.2, cleo-2.1.0, crashtest-0.4.1, dulwich-0.21.7, fastjsonschema-2.19.1, html5lib-1.1, idna-3.6, importlib_metadata-7.0.1, installer-0.7.0, jaraco.classes-3.3.0, jeepney-0.8.0, jsonschema-4.21.0, jsonschema_specifications-2023.12.1, keyring-24.3.0, lockfile-0.12.2, more-itertools-10.2.0, msgpack-1.0.7, pexpect-4.9.0, pkginfo-1.9.6, platformdirs-3.11.0, poetry-1.7.1, poetry_core-1.8.1, poetry_plugin_export-1.6.0, ptyprocess-0.7.0, pyrsistent-0.20.0, rapidfuzz-3.6.1, referencing-0.32.1, requests-2.31.0, requests-toolbelt-1.0.0, rpds_py-0.17.1, SecretStorage-3.3.3, shellingham-1.5.4, six-1.16.0, tomlkit-0.12.3, urllib3-2.1.0, webencodings-0.5.1, zipp-3.17.0
66+
5967
### poetry/1.6.1-GCCcore-13.2.0
6068

6169
This is a list of extensions included in the module:

mkdocs.yml

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -206,7 +206,7 @@ extra:
206206
- icon: fontawesome/brands/twitter
207207
link: https://twitter.com/eessi_hpc
208208
# this gets auto-updated via update_generated_time.sh script run in update_available_software.yml action
209-
generated_time: "Fri, 06 Feb 2026 at 13:12:13 UTC"
209+
generated_time: "Wed, 11 Feb 2026 at 13:39:38 UTC"
210210
slack_invite_url: "https://join.slack.com/t/eessi-hpc/shared_invite/zt-2wg10p26d-m_CnRB89xQq3zk9qxf1k3g"
211211
extra_javascript:
212212
# mermaid diagram

0 commit comments

Comments
 (0)