Merge branch 'compressed-lists' of https://github.com/biocpy/rds2py into compressed-lists

Author: jkanche

tests/test_atomics.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 from biocutils import BooleanList, FloatList, IntegerList, StringList

tests/test_delayedmatrices.py

@@ -7,6 +7,7 @@
 __copyright__ = "jkanche"
 __license__ = "MIT"
 
+
 @pytest.mark.skip(reason="delayedarray uses full file paths. this should be run locally.")
 def test_read_h5sparse():
     array = read_rds("tests/data/h5sparse.rds")

tests/test_dict.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 __author__ = "jkanche"

tests/test_factors.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 __author__ = "jkanche"

tests/test_frames.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 from biocframe import BiocFrame
 

tests/test_granges.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 from genomicranges import GenomicRanges, GenomicRangesList

tests/test_mae.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 from multiassayexperiment import MultiAssayExperiment

tests/test_matrices.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 import numpy as np
 from scipy import sparse as sp
@@ -17,6 +15,7 @@ def test_read_s4_matrix_dgc():
     assert array is not None
     assert isinstance(array, sp.spmatrix)
 
+
 def test_read_s4_matrix_dgc_with_rownames():
     array = read_rds("tests/data/matrix_with_row_names.rds")
 
@@ -34,6 +33,7 @@ def test_read_s4_matrix_dgc_with_bothnames():
     assert len(array.dimnames[0]) == 100
     assert len(array.dimnames[1]) == 10
 
+
 def test_read_s4_matrix_dgt():
     array = read_rds("tests/data/s4_matrix_dgt.rds")
 

tests/test_rle.py

@@ -1,8 +1,5 @@
-import pytest
-
 from rds2py import read_rds
 
-from biocutils import BooleanList, FloatList, IntegerList, StringList
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"

tests/test_sce.py

@@ -1,5 +1,3 @@
-import pytest
-
 from rds2py import read_rds
 
 from singlecellexperiment import SingleCellExperiment