rename files, bump version

Author: jkanche

CHANGELOG.md

@@ -1,11 +1,10 @@
 # Changelog
 
-## Version 0.6.0 - 0.6.1
+## Version 0.6.0 - 0.6.2
 
 - Classes now extend `BiocObject` from biocutils, which provides a metadata field.
 - `valdiate` is renamed to `_validate` for consistency with other classes and packages.
 - Update github actions to run from 3.10 - 3.14.
-- rename classes to follow PEP guidelines.
 
 ## Version 0.5.4 - 0.5.5
 

src/summarizedexperiment/RangedSummarizedExperiment.py

@@ -16,7 +16,7 @@
     relaxed_merge_assays,
 )
 from ._frameutils import is_pandas
-from .SummarrizedExperiment import SummarizedExperiment
+from .SummarizedExperiment import SummarizedExperiment
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"

…rizedexperiment/SummarrizedExperiment.py …arizedexperiment/SummarizedExperiment.pysrc/summarizedexperiment/SummarrizedExperiment.py renamed to src/summarizedexperiment/SummarizedExperiment.py src/summarizedexperiment/SummarrizedExperiment.py renamed to src/summarizedexperiment/SummarizedExperiment.py

@@ -15,5 +15,5 @@
 finally:
     del version, PackageNotFoundError
 
-from .SummarrizedExperiment import SummarizedExperiment
+from .SummarizedExperiment import SummarizedExperiment
 from .RangedSummarizedExperiment import RangedSummarizedExperiment

src/summarizedexperiment/__init__.py

@@ -2,7 +2,7 @@
 import numpy as np
 import scipy.sparse as sp
 from biocframe import BiocFrame
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 
 
 ncols = 10

tests/data/summarized_experiments.py

@@ -5,7 +5,7 @@
 import pandas as pd
 import pytest
 from summarizedexperiment.RangedSummarizedExperiment import RangedSummarizedExperiment
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 
 __author__ = "jkanche"
 __copyright__ = "jkanche"

tests/test_RSE_methods.py

@@ -3,7 +3,7 @@
 from biocframe import BiocFrame
 import numpy as np
 import pandas as pd
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 import delayedarray
 from anndata import AnnData
 

tests/test_SE.py

@@ -4,7 +4,7 @@
 import pandas as pd
 import pytest
 import biocutils
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 
 __author__ = "keviny2, jkanche"
 __copyright__ = "keviny2"

tests/test_SE_combine_cols.py

@@ -4,7 +4,7 @@
 import pandas as pd
 import pytest
 import biocutils
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 
 __author__ = "keviny2, jkanche"
 __copyright__ = "keviny2"

tests/test_SE_combine_rows.py

@@ -2,7 +2,7 @@
 
 from biocframe import BiocFrame
 import numpy as np
-from summarizedexperiment.SummarrizedExperiment import SummarizedExperiment
+from summarizedexperiment.SummarizedExperiment import SummarizedExperiment
 from summarizedexperiment.RangedSummarizedExperiment import RangedSummarizedExperiment
 
 import pytest